RNA–Protein interactions for RNA: ENST00000466218.5

SFXN4-206, Transcript of sideroflexin 4, humanhuman

TSL 5

Gene SFXN4, Length 764 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-206ENST00000466218 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
SFXN4-206ENST00000466218 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
SFXN4-206ENST00000466218 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
SFXN4-206ENST00000466218 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
SFXN4-206ENST00000466218 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
SFXN4-206ENST00000466218 FOXD1Q16676 465 aa15.02■□□□□ -0
SFXN4-206ENST00000466218 ADRA2BP18089 450 aa14.83□□□□□ -0.04
SFXN4-206ENST00000466218 PPP6R1Q9UPN7 881 aa14.78□□□□□ -0.04
SFXN4-206ENST00000466218 NISCHQ9Y2I1 1504 aa14.65□□□□□ -0.06
SFXN4-206ENST00000466218 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
SFXN4-206ENST00000466218 KCNA4P22459 653 aa14.29□□□□□ -0.12
SFXN4-206ENST00000466218 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
SFXN4-206ENST00000466218 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
SFXN4-206ENST00000466218 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
SFXN4-206ENST00000466218 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
SFXN4-206ENST00000466218 MSH5O43196 834 aa13.81□□□□□ -0.2
SFXN4-206ENST00000466218 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
SFXN4-206ENST00000466218 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
SFXN4-206ENST00000466218 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
SFXN4-206ENST00000466218 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
SFXN4-206ENST00000466218 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
SFXN4-206ENST00000466218 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
SFXN4-206ENST00000466218 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
SFXN4-206ENST00000466218 ABCC9O60706 1549 aa13.26□□□□□ -0.29
SFXN4-206ENST00000466218 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
SFXN4-206ENST00000466218 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
SFXN4-206ENST00000466218 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
SFXN4-206ENST00000466218 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
SFXN4-206ENST00000466218 ZBTB22O15209 634 aa13.1□□□□□ -0.31
SFXN4-206ENST00000466218 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
SFXN4-206ENST00000466218 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
SFXN4-206ENST00000466218 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
SFXN4-206ENST00000466218 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
SFXN4-206ENST00000466218 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
SFXN4-206ENST00000466218 NACADO15069 1562 aa12.55□□□□□ -0.4
SFXN4-206ENST00000466218 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
SFXN4-206ENST00000466218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 20.4
SFXN4-206ENST00000466218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
SFXN4-206ENST00000466218 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
SFXN4-206ENST00000466218 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
SFXN4-206ENST00000466218 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
SFXN4-206ENST00000466218 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
SFXN4-206ENST00000466218 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
SFXN4-206ENST00000466218 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
SFXN4-206ENST00000466218 APLP2Q06481 763 aa12.25□□□□□ -0.45
SFXN4-206ENST00000466218 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
SFXN4-206ENST00000466218 DCAF8L2P0C7V8 631 aa12.23□□□□□ -0.45
SFXN4-206ENST00000466218 FKBP8Q14318 412 aa12.22□□□□□ -0.45
SFXN4-206ENST00000466218 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
SFXN4-206ENST00000466218 DCAF1Q9Y4B6 1507 aa12.17□□□□□ -0.46
SFXN4-206ENST00000466218 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
SFXN4-206ENST00000466218 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
SFXN4-206ENST00000466218 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
SFXN4-206ENST00000466218 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
SFXN4-206ENST00000466218 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
SFXN4-206ENST00000466218 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
SFXN4-206ENST00000466218 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
SFXN4-206ENST00000466218 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
SFXN4-206ENST00000466218 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
SFXN4-206ENST00000466218 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
SFXN4-206ENST00000466218 FBLN2P98095 1184 aa11.82□□□□□ -0.52
SFXN4-206ENST00000466218 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
SFXN4-206ENST00000466218 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
SFXN4-206ENST00000466218 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
SFXN4-206ENST00000466218 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
SFXN4-206ENST00000466218 CAPN15O75808 1086 aa11.75□□□□□ -0.53
SFXN4-206ENST00000466218 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
SFXN4-206ENST00000466218 DNAJC5Q9H3Z4 198 aa11.75□□□□□ -0.53
SFXN4-206ENST00000466218 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
SFXN4-206ENST00000466218 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
SFXN4-206ENST00000466218 POLA2Q14181 598 aa11.7□□□□□ -0.54
SFXN4-206ENST00000466218 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
SFXN4-206ENST00000466218 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
SFXN4-206ENST00000466218 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
SFXN4-206ENST00000466218 PROM2Q8N271 834 aa11.6□□□□□ -0.55
SFXN4-206ENST00000466218 CUX2O14529 1486 aa11.57□□□□□ -0.56
SFXN4-206ENST00000466218 ABCB7O75027 752 aa11.5□□□□□ -0.57
SFXN4-206ENST00000466218 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
SFXN4-206ENST00000466218 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
SFXN4-206ENST00000466218 HMGXB3Q12766 1538 aa11.49□□□□□ -0.57
SFXN4-206ENST00000466218 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
SFXN4-206ENST00000466218 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SFXN4-206ENST00000466218 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
SFXN4-206ENST00000466218 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
SFXN4-206ENST00000466218 DSG3P32926 999 aa11.38□□□□□ -0.59
SFXN4-206ENST00000466218 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
SFXN4-206ENST00000466218 NESP48681 1621 aa11.36□□□□□ -0.59
SFXN4-206ENST00000466218 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SFXN4-206ENST00000466218 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
SFXN4-206ENST00000466218 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
SFXN4-206ENST00000466218 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
SFXN4-206ENST00000466218 LAMC3Q9Y6N6 1575 aa11.33□□□□□ -0.6
SFXN4-206ENST00000466218 BAZ1BQ9UIG0 1483 aaKnown RBP11.33□□□□□ -0.6
SFXN4-206ENST00000466218 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
SFXN4-206ENST00000466218 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
SFXN4-206ENST00000466218 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
SFXN4-206ENST00000466218 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
SFXN4-206ENST00000466218 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
SFXN4-206ENST00000466218 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
SFXN4-206ENST00000466218 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms