RNA–Protein interactions for RNA: ENST00000464984.1

SVIL-206, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-206ENST00000464984 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
SVIL-206ENST00000464984 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
SVIL-206ENST00000464984 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
SVIL-206ENST00000464984 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
SVIL-206ENST00000464984 FOXD1Q16676 465 aa19.82■□□□□ 0.76
SVIL-206ENST00000464984 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
SVIL-206ENST00000464984 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
SVIL-206ENST00000464984 ADRA2BP18089 450 aa18.65■□□□□ 0.58
SVIL-206ENST00000464984 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
SVIL-206ENST00000464984 MSH5O43196 834 aa18.36■□□□□ 0.53
SVIL-206ENST00000464984 NISCHQ9Y2I1 1504 aa18.01■□□□□ 0.47
SVIL-206ENST00000464984 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
SVIL-206ENST00000464984 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
SVIL-206ENST00000464984 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
SVIL-206ENST00000464984 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
SVIL-206ENST00000464984 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
SVIL-206ENST00000464984 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
SVIL-206ENST00000464984 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
SVIL-206ENST00000464984 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
SVIL-206ENST00000464984 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
SVIL-206ENST00000464984 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
SVIL-206ENST00000464984 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
SVIL-206ENST00000464984 KCNA4P22459 653 aa15.86■□□□□ 0.13
SVIL-206ENST00000464984 CCDC180Q9P1Z9 1646 aa15.77■□□□□ 0.12
SVIL-206ENST00000464984 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
SVIL-206ENST00000464984 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SVIL-206ENST00000464984 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
SVIL-206ENST00000464984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
SVIL-206ENST00000464984 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
SVIL-206ENST00000464984 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
SVIL-206ENST00000464984 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
SVIL-206ENST00000464984 ABCC9O60706 1549 aa15.18■□□□□ 0.02
SVIL-206ENST00000464984 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
SVIL-206ENST00000464984 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
SVIL-206ENST00000464984 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
SVIL-206ENST00000464984 CAPN15O75808 1086 aa14.95□□□□□ -0.02
SVIL-206ENST00000464984 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
SVIL-206ENST00000464984 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
SVIL-206ENST00000464984 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
SVIL-206ENST00000464984 NACADO15069 1562 aa14.85□□□□□ -0.03
SVIL-206ENST00000464984 DSG3P32926 999 aa14.82□□□□□ -0.04
SVIL-206ENST00000464984 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
SVIL-206ENST00000464984 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
SVIL-206ENST00000464984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
SVIL-206ENST00000464984 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
SVIL-206ENST00000464984 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
SVIL-206ENST00000464984 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
SVIL-206ENST00000464984 ABCB7O75027 752 aa14.69□□□□□ -0.06
SVIL-206ENST00000464984 APLP2Q06481 763 aa14.68□□□□□ -0.06
SVIL-206ENST00000464984 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
SVIL-206ENST00000464984 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
SVIL-206ENST00000464984 ZBTB22O15209 634 aa14.63□□□□□ -0.07
SVIL-206ENST00000464984 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
SVIL-206ENST00000464984 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
SVIL-206ENST00000464984 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
SVIL-206ENST00000464984 POLA2Q14181 598 aa14.39□□□□□ -0.11
SVIL-206ENST00000464984 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SVIL-206ENST00000464984 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
SVIL-206ENST00000464984 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
SVIL-206ENST00000464984 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
SVIL-206ENST00000464984 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
SVIL-206ENST00000464984 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
SVIL-206ENST00000464984 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
SVIL-206ENST00000464984 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
SVIL-206ENST00000464984 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
SVIL-206ENST00000464984 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
SVIL-206ENST00000464984 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.18
SVIL-206ENST00000464984 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
SVIL-206ENST00000464984 POTEHQ6S545 545 aa13.93□□□□□ -0.18
SVIL-206ENST00000464984 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
SVIL-206ENST00000464984 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
SVIL-206ENST00000464984 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
SVIL-206ENST00000464984 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
SVIL-206ENST00000464984 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
SVIL-206ENST00000464984 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
SVIL-206ENST00000464984 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
SVIL-206ENST00000464984 FBLN2P98095 1184 aa13.76□□□□□ -0.21
SVIL-206ENST00000464984 ATAD2BQ9ULI0 1458 aa13.75□□□□□ -0.21
SVIL-206ENST00000464984 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
SVIL-206ENST00000464984 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
SVIL-206ENST00000464984 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.22
SVIL-206ENST00000464984 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
SVIL-206ENST00000464984 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
SVIL-206ENST00000464984 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
SVIL-206ENST00000464984 WIZO95785 1651 aa13.68□□□□□ -0.22
SVIL-206ENST00000464984 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
SVIL-206ENST00000464984 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
SVIL-206ENST00000464984 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
SVIL-206ENST00000464984 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
SVIL-206ENST00000464984 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
SVIL-206ENST00000464984 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
SVIL-206ENST00000464984 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
SVIL-206ENST00000464984 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
SVIL-206ENST00000464984 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
SVIL-206ENST00000464984 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
SVIL-206ENST00000464984 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
SVIL-206ENST00000464984 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
SVIL-206ENST00000464984 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
SVIL-206ENST00000464984 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
SVIL-206ENST00000464984 CFTRP13569 1480 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms