RNA–Protein interactions for RNA: ENST00000464758.1

MRPL38-204, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-204ENST00000464758 NISCHQ9Y2I1 1504 aa54.83■■■■■ 6.37
MRPL38-204ENST00000464758 CCDC180Q9P1Z9 1646 aa49.13■■■■■ 5.46
MRPL38-204ENST00000464758 ABCC9O60706 1549 aa48.62■■■■■ 5.37
MRPL38-204ENST00000464758 RB1CC1Q8TDY2 1594 aa46.52■■■■■ 5.04
MRPL38-204ENST00000464758 NACADO15069 1562 aa46.31■■■■■ 5
MRPL38-204ENST00000464758 DCAF8L2P0C7V8 631 aa45.92■■■■■ 4.94
MRPL38-204ENST00000464758 MYO15BQ96JP2 1530 aa45.85■■■■■ 4.93
MRPL38-204ENST00000464758 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
MRPL38-204ENST00000464758 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
MRPL38-204ENST00000464758 DCAF1Q9Y4B6 1507 aa45.38■■■■■ 4.86
MRPL38-204ENST00000464758 PABPN1Q86U42 306 aaKnown RBP eCLIP45.25■■■■■ 4.83
MRPL38-204ENST00000464758 DNAJC5BQ9UF47 199 aa45.21■■■■■ 4.83
MRPL38-204ENST00000464758 BICRAQ9NZM4 1560 aa45.16■■■■■ 4.82
MRPL38-204ENST00000464758 SCRIBQ14160 1630 aa44.69■■■■■ 4.74
MRPL38-204ENST00000464758 SHROOM4Q9ULL8 1493 aa44.67■■■■■ 4.74
MRPL38-204ENST00000464758 EIF4G1Q04637 1599 aaKnown RBP44.01■■■■■ 4.64
MRPL38-204ENST00000464758 CC2D2AQ9P2K1 1620 aa44■■■■■ 4.63
MRPL38-204ENST00000464758 CECR2Q9BXF3 1484 aa43.78■■■■■ 4.6
MRPL38-204ENST00000464758 SMARCA4P51532 1647 aa42.72■■■■■ 4.43
MRPL38-204ENST00000464758 NCAPD3P42695 1498 aa42.72■■■■■ 4.43
MRPL38-204ENST00000464758 ATAD2BQ9ULI0 1458 aa42.63■■■■■ 4.42
MRPL38-204ENST00000464758 SMARCA2P51531 1590 aa42.57■■■■■ 4.41
MRPL38-204ENST00000464758 BAZ1AQ9NRL2 1556 aaPredicted RBP42.56■■■■■ 4.4
MRPL38-204ENST00000464758 HMGXB3Q12766 1538 aa42.49■■■■■ 4.39
MRPL38-204ENST00000464758 PEG3Q9GZU2 1588 aa42.35■■■■■ 4.37
MRPL38-204ENST00000464758 BAZ1BQ9UIG0 1483 aaKnown RBP42.24■■■■■ 4.35
MRPL38-204ENST00000464758 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
MRPL38-204ENST00000464758 ERCC6Q03468 1493 aa41.97■■■■■ 4.31
MRPL38-204ENST00000464758 NESP48681 1621 aa41.87■■■■■ 4.29
MRPL38-204ENST00000464758 CUX2O14529 1486 aa41.83■■■■■ 4.29
MRPL38-204ENST00000464758 WIZO95785 1651 aa41.74■■■■■ 4.27
MRPL38-204ENST00000464758 LAMC3Q9Y6N6 1575 aa41.73■■■■■ 4.27
MRPL38-204ENST00000464758 RSF1Q96T23 1441 aaPredicted RBP41.48■■■■■ 4.23
MRPL38-204ENST00000464758 THOC2Q8NI27 1593 aaKnown RBP41.47■■■■■ 4.23
MRPL38-204ENST00000464758 KIF21AQ7Z4S6 1674 aa41.42■■■■■ 4.22
MRPL38-204ENST00000464758 PDS5BQ9NTI5 1447 aa41.42■■■■■ 4.22
MRPL38-204ENST00000464758 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
MRPL38-204ENST00000464758 TOP2AP11388 1531 aaKnown RBP41.28■■■■■ 4.2
MRPL38-204ENST00000464758 DNAJC5Q9H3Z4 198 aa41.28■■■■■ 4.2
MRPL38-204ENST00000464758 MRC2Q9UBG0 1479 aa41.07■■■■■ 4.16
MRPL38-204ENST00000464758 CFTRP13569 1480 aa41.05■■■■■ 4.16
MRPL38-204ENST00000464758 WDR62O43379 1518 aa40.99■■■■■ 4.15
MRPL38-204ENST00000464758 CEP164Q9UPV0 1460 aa40.97■■■■■ 4.15
MRPL38-204ENST00000464758 FANCD2Q9BXW9 1451 aa40.95■■■■■ 4.15
MRPL38-204ENST00000464758 PRDM2Q13029 1718 aa40.77■■■■■ 4.12
MRPL38-204ENST00000464758 CCDC88BA6NC98 1476 aa40.75■■■■■ 4.11
MRPL38-204ENST00000464758 URB2Q14146 1524 aaKnown RBP40.59■■■■■ 4.09
MRPL38-204ENST00000464758 TOPBP1Q92547 1522 aa40.23■■■■■ 4.03
MRPL38-204ENST00000464758 ABCC8Q09428 1581 aa40.19■■■■■ 4.02
MRPL38-204ENST00000464758 DNMBPQ6XZF7 1577 aa40.14■■■■■ 4.02
MRPL38-204ENST00000464758 IFT140Q96RY7 1462 aa40.14■■■■■ 4.02
MRPL38-204ENST00000464758 ZNF608Q9ULD9 1512 aaPredicted RBP40.01■■■■□ 3.99
MRPL38-204ENST00000464758 OSCARQ8IYS5 282 aa39.88■■■■□ 3.97
MRPL38-204ENST00000464758 EIF4G3O43432 1585 aaKnown RBP39.88■■■■□ 3.97
MRPL38-204ENST00000464758 TARBP1Q13395 1621 aaKnown RBP39.87■■■■□ 3.97
MRPL38-204ENST00000464758 POLA1P09884 1462 aaPredicted RBP39.84■■■■□ 3.97
MRPL38-204ENST00000464758 SUPT5HO00267 1087 aaKnown RBP39.79■■■■□ 3.96
MRPL38-204ENST00000464758 AQRO60306 1485 aaKnown RBP eCLIP39.67■■■■□ 3.941e-6■■□□□ 12.5
MRPL38-204ENST00000464758 CUX1P39880 1505 aa39.66■■■■□ 3.94
MRPL38-204ENST00000464758 FGD5Q6ZNL6 1462 aa39.63■■■■□ 3.94
MRPL38-204ENST00000464758 RAD54L2Q9Y4B4 1467 aa39.63■■■■□ 3.94
MRPL38-204ENST00000464758 SOGA1O94964 1423 aa39.61■■■■□ 3.93
MRPL38-204ENST00000464758 WDR97A6NE52 1622 aa39.56■■■■□ 3.92
MRPL38-204ENST00000464758 TRIM41Q8WV44 630 aa39.56■■■■□ 3.92
MRPL38-204ENST00000464758 CHD1O14646 1710 aa39.51■■■■□ 3.91
MRPL38-204ENST00000464758 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
MRPL38-204ENST00000464758 RIMBP3CA6NJZ7 1639 aa39.4■■■■□ 3.9
MRPL38-204ENST00000464758 RIMBP3BA6NNM3 1639 aa39.4■■■■□ 3.9
MRPL38-204ENST00000464758 RIMBP3Q9UFD9 1639 aa39.4■■■■□ 3.9
MRPL38-204ENST00000464758 SNAPC4Q5SXM2 1469 aa39.31■■■■□ 3.88
MRPL38-204ENST00000464758 ARHGEF11O15085 1522 aa39.31■■■■□ 3.88
MRPL38-204ENST00000464758 GRIN2BQ13224 1484 aa39.27■■■■□ 3.88
MRPL38-204ENST00000464758 MAGI1Q96QZ7 1491 aaPredicted RBP39.27■■■■□ 3.88
MRPL38-204ENST00000464758 FBLN2P98095 1184 aa39.25■■■■□ 3.87
MRPL38-204ENST00000464758 ABCA10Q8WWZ4 1543 aa39.24■■■■□ 3.87
MRPL38-204ENST00000464758 PBRM1Q86U86 1689 aa39.2■■■■□ 3.87
MRPL38-204ENST00000464758 BIVM-ERCC5R4GMW8 1640 aa39.19■■■■□ 3.86
MRPL38-204ENST00000464758 ABCA5Q8WWZ7 1642 aa39.18■■■■□ 3.86
MRPL38-204ENST00000464758 GAPVD1Q14C86 1478 aa39.17■■■■□ 3.86
MRPL38-204ENST00000464758 TOP2BQ02880 1626 aa39.17■■■■□ 3.86
MRPL38-204ENST00000464758 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
MRPL38-204ENST00000464758 SYNJ2O15056 1496 aa39.11■■■■□ 3.85
MRPL38-204ENST00000464758 SYNJ1O43426 1573 aa39.11■■■■□ 3.85
MRPL38-204ENST00000464758 CHMP7Q8WUX9 453 aaPredicted RBP39.07■■■■□ 3.85
MRPL38-204ENST00000464758 CLASP1Q7Z460 1538 aa39.06■■■■□ 3.84
MRPL38-204ENST00000464758 ARAP1Q96P48 1450 aa38.94■■■■□ 3.82
MRPL38-204ENST00000464758 CYB5RLQ6IPT4 315 aa38.88■■■■□ 3.81
MRPL38-204ENST00000464758 ADAMTS12P58397 1594 aa38.84■■■■□ 3.81
MRPL38-204ENST00000464758 GRIN2AQ12879 1464 aa38.79■■■■□ 3.8
MRPL38-204ENST00000464758 ERICH3Q5RHP9 1530 aa38.77■■■■□ 3.8
MRPL38-204ENST00000464758 FHAD1B1AJZ9 1412 aa38.7■■■■□ 3.79
MRPL38-204ENST00000464758 NUP160Q12769 1436 aa38.65■■■■□ 3.78
MRPL38-204ENST00000464758 CEP170Q5SW79 1584 aa38.63■■■■□ 3.77
MRPL38-204ENST00000464758 SHROOM2Q13796 1616 aa38.48■■■■□ 3.75
MRPL38-204ENST00000464758 ERCC6L2Q5T890 1561 aa38.43■■■■□ 3.74
MRPL38-204ENST00000464758 KIF27Q86VH2 1401 aa38.37■■■■□ 3.73
MRPL38-204ENST00000464758 TRHP20396 242 aaPredicted RBP38.31■■■■□ 3.72
MRPL38-204ENST00000464758 RUSC2Q8N2Y8 1516 aa38.3■■■■□ 3.72
MRPL38-204ENST00000464758 CUL7Q14999 1698 aa38.3■■■■□ 3.72
MRPL38-204ENST00000464758 IGF1RP08069 1367 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms