RNA–Protein interactions for RNA: ENST00000464584.2

RN7SKP241-201, Transcript of RNA, 7SK small nuclear pseudogene 241, humanhuman

BASIC

Gene RN7SKP241, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP241-201ENST00000464584 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
RN7SKP241-201ENST00000464584 ABCC9O60706 1549 aa17.49■□□□□ 0.39
RN7SKP241-201ENST00000464584 CCDC180Q9P1Z9 1646 aa17.03■□□□□ 0.32
RN7SKP241-201ENST00000464584 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
RN7SKP241-201ENST00000464584 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
RN7SKP241-201ENST00000464584 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
RN7SKP241-201ENST00000464584 NACADO15069 1562 aa16.18■□□□□ 0.18
RN7SKP241-201ENST00000464584 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
RN7SKP241-201ENST00000464584 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
RN7SKP241-201ENST00000464584 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
RN7SKP241-201ENST00000464584 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
RN7SKP241-201ENST00000464584 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
RN7SKP241-201ENST00000464584 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
RN7SKP241-201ENST00000464584 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
RN7SKP241-201ENST00000464584 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
RN7SKP241-201ENST00000464584 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
RN7SKP241-201ENST00000464584 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.12
RN7SKP241-201ENST00000464584 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
RN7SKP241-201ENST00000464584 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
RN7SKP241-201ENST00000464584 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
RN7SKP241-201ENST00000464584 CUX2O14529 1486 aa15.33■□□□□ 0.04
RN7SKP241-201ENST00000464584 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
RN7SKP241-201ENST00000464584 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
RN7SKP241-201ENST00000464584 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
RN7SKP241-201ENST00000464584 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
RN7SKP241-201ENST00000464584 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
RN7SKP241-201ENST00000464584 NESP48681 1621 aa14.92□□□□□ -0.02
RN7SKP241-201ENST00000464584 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
RN7SKP241-201ENST00000464584 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
RN7SKP241-201ENST00000464584 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
RN7SKP241-201ENST00000464584 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
RN7SKP241-201ENST00000464584 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
RN7SKP241-201ENST00000464584 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
RN7SKP241-201ENST00000464584 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
RN7SKP241-201ENST00000464584 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.05
RN7SKP241-201ENST00000464584 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
RN7SKP241-201ENST00000464584 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
RN7SKP241-201ENST00000464584 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
RN7SKP241-201ENST00000464584 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
RN7SKP241-201ENST00000464584 WIZO95785 1651 aa14.58□□□□□ -0.07
RN7SKP241-201ENST00000464584 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
RN7SKP241-201ENST00000464584 WDR62O43379 1518 aa14.56□□□□□ -0.08
RN7SKP241-201ENST00000464584 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
RN7SKP241-201ENST00000464584 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
RN7SKP241-201ENST00000464584 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
RN7SKP241-201ENST00000464584 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
RN7SKP241-201ENST00000464584 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
RN7SKP241-201ENST00000464584 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
RN7SKP241-201ENST00000464584 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
RN7SKP241-201ENST00000464584 EEA1Q15075 1411 aa14.41□□□□□ -0.1
RN7SKP241-201ENST00000464584 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP241-201ENST00000464584 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
RN7SKP241-201ENST00000464584 HRCP23327 699 aa14.36□□□□□ -0.11
RN7SKP241-201ENST00000464584 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
RN7SKP241-201ENST00000464584 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
RN7SKP241-201ENST00000464584 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
RN7SKP241-201ENST00000464584 ZEB1P37275 1124 aaPredicted RBP14.29□□□□□ -0.12
RN7SKP241-201ENST00000464584 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
RN7SKP241-201ENST00000464584 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
RN7SKP241-201ENST00000464584 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
RN7SKP241-201ENST00000464584 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
RN7SKP241-201ENST00000464584 CFTRP13569 1480 aa14.18□□□□□ -0.14
RN7SKP241-201ENST00000464584 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
RN7SKP241-201ENST00000464584 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
RN7SKP241-201ENST00000464584 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
RN7SKP241-201ENST00000464584 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
RN7SKP241-201ENST00000464584 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
RN7SKP241-201ENST00000464584 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
RN7SKP241-201ENST00000464584 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP241-201ENST00000464584 GOLGA3Q08378 1498 aa14.11□□□□□ -0.15
RN7SKP241-201ENST00000464584 CHD1O14646 1710 aa14.09□□□□□ -0.15
RN7SKP241-201ENST00000464584 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
RN7SKP241-201ENST00000464584 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
RN7SKP241-201ENST00000464584 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
RN7SKP241-201ENST00000464584 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
RN7SKP241-201ENST00000464584 UBTFP17480 764 aaKnown RBP14.04□□□□□ -0.16
RN7SKP241-201ENST00000464584 CEP162Q5TB80 1403 aa14.02□□□□□ -0.16
RN7SKP241-201ENST00000464584 SOGA1O94964 1423 aa14.01□□□□□ -0.17
RN7SKP241-201ENST00000464584 KIF21BO75037 1637 aa14.01□□□□□ -0.17
RN7SKP241-201ENST00000464584 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
RN7SKP241-201ENST00000464584 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
RN7SKP241-201ENST00000464584 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
RN7SKP241-201ENST00000464584 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
RN7SKP241-201ENST00000464584 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
RN7SKP241-201ENST00000464584 APLP2Q06481 763 aa13.94□□□□□ -0.18
RN7SKP241-201ENST00000464584 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
RN7SKP241-201ENST00000464584 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
RN7SKP241-201ENST00000464584 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.18
RN7SKP241-201ENST00000464584 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
RN7SKP241-201ENST00000464584 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
RN7SKP241-201ENST00000464584 CLIP1P30622 1438 aa13.87□□□□□ -0.19
RN7SKP241-201ENST00000464584 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
RN7SKP241-201ENST00000464584 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
RN7SKP241-201ENST00000464584 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
RN7SKP241-201ENST00000464584 FBLN2P98095 1184 aa13.8□□□□□ -0.2
RN7SKP241-201ENST00000464584 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
RN7SKP241-201ENST00000464584 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
RN7SKP241-201ENST00000464584 PRXQ9BXM0 1461 aa13.78□□□□□ -0.2
RN7SKP241-201ENST00000464584 CUX1P39880 1505 aa13.76□□□□□ -0.21
RN7SKP241-201ENST00000464584 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms