RNA–Protein interactions for RNA: ENST00000464381.5

NCOR1-212, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 2,474 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-212ENST00000464381 NISCHQ9Y2I1 1504 aa18.12■□□□□ 0.49
NCOR1-212ENST00000464381 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.15
NCOR1-212ENST00000464381 ABCC9O60706 1549 aa15.44■□□□□ 0.06
NCOR1-212ENST00000464381 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
NCOR1-212ENST00000464381 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
NCOR1-212ENST00000464381 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
NCOR1-212ENST00000464381 NACADO15069 1562 aa15.02■□□□□ -0
NCOR1-212ENST00000464381 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
NCOR1-212ENST00000464381 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
NCOR1-212ENST00000464381 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
NCOR1-212ENST00000464381 SCRIBQ14160 1630 aa14.58□□□□□ -0.07
NCOR1-212ENST00000464381 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
NCOR1-212ENST00000464381 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
NCOR1-212ENST00000464381 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
NCOR1-212ENST00000464381 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
NCOR1-212ENST00000464381 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
NCOR1-212ENST00000464381 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
NCOR1-212ENST00000464381 BAZ1AQ9NRL2 1556 aaPredicted RBP14.02□□□□□ -0.17
NCOR1-212ENST00000464381 SMARCA4P51532 1647 aa14□□□□□ -0.17
NCOR1-212ENST00000464381 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
NCOR1-212ENST00000464381 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
NCOR1-212ENST00000464381 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.19
NCOR1-212ENST00000464381 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
NCOR1-212ENST00000464381 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
NCOR1-212ENST00000464381 RSF1Q96T23 1441 aaPredicted RBP13.87□□□□□ -0.19
NCOR1-212ENST00000464381 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
NCOR1-212ENST00000464381 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
NCOR1-212ENST00000464381 WIZO95785 1651 aa13.8□□□□□ -0.2
NCOR1-212ENST00000464381 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
NCOR1-212ENST00000464381 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
NCOR1-212ENST00000464381 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
NCOR1-212ENST00000464381 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
NCOR1-212ENST00000464381 CADPSQ9ULU8 1353 aa13.46□□□□□ -0.25
NCOR1-212ENST00000464381 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
NCOR1-212ENST00000464381 NESP48681 1621 aa13.43□□□□□ -0.26
NCOR1-212ENST00000464381 CFTRP13569 1480 aa13.43□□□□□ -0.26
NCOR1-212ENST00000464381 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
NCOR1-212ENST00000464381 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
NCOR1-212ENST00000464381 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
NCOR1-212ENST00000464381 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
NCOR1-212ENST00000464381 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.28
NCOR1-212ENST00000464381 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
NCOR1-212ENST00000464381 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
NCOR1-212ENST00000464381 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
NCOR1-212ENST00000464381 WDR62O43379 1518 aa13.15□□□□□ -0.3
NCOR1-212ENST00000464381 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
NCOR1-212ENST00000464381 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
NCOR1-212ENST00000464381 CUX2O14529 1486 aa13.12□□□□□ -0.31
NCOR1-212ENST00000464381 DNMBPQ6XZF7 1577 aa13.1□□□□□ -0.31
NCOR1-212ENST00000464381 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
NCOR1-212ENST00000464381 CUX1P39880 1505 aa13.08□□□□□ -0.32
NCOR1-212ENST00000464381 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
NCOR1-212ENST00000464381 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
NCOR1-212ENST00000464381 BIVM-ERCC5R4GMW8 1640 aa13.02□□□□□ -0.33
NCOR1-212ENST00000464381 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
NCOR1-212ENST00000464381 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
NCOR1-212ENST00000464381 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
NCOR1-212ENST00000464381 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
NCOR1-212ENST00000464381 SOGA1O94964 1423 aa12.96□□□□□ -0.34
NCOR1-212ENST00000464381 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
NCOR1-212ENST00000464381 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
NCOR1-212ENST00000464381 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
NCOR1-212ENST00000464381 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
NCOR1-212ENST00000464381 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
NCOR1-212ENST00000464381 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
NCOR1-212ENST00000464381 CHIC1Q5VXU3 224 aa12.87□□□□□ -0.35
NCOR1-212ENST00000464381 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
NCOR1-212ENST00000464381 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■■■■ 28.7
NCOR1-212ENST00000464381 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
NCOR1-212ENST00000464381 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
NCOR1-212ENST00000464381 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
NCOR1-212ENST00000464381 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
NCOR1-212ENST00000464381 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
NCOR1-212ENST00000464381 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
NCOR1-212ENST00000464381 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
NCOR1-212ENST00000464381 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
NCOR1-212ENST00000464381 IGF1RP08069 1367 aa12.72□□□□□ -0.37
NCOR1-212ENST00000464381 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
NCOR1-212ENST00000464381 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
NCOR1-212ENST00000464381 EEA1Q15075 1411 aa12.68□□□□□ -0.38
NCOR1-212ENST00000464381 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
NCOR1-212ENST00000464381 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
NCOR1-212ENST00000464381 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
NCOR1-212ENST00000464381 CUL7Q14999 1698 aa12.65□□□□□ -0.38
NCOR1-212ENST00000464381 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
NCOR1-212ENST00000464381 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
NCOR1-212ENST00000464381 CHD1O14646 1710 aa12.63□□□□□ -0.39
NCOR1-212ENST00000464381 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
NCOR1-212ENST00000464381 FBLN2P98095 1184 aa12.61□□□□□ -0.39
NCOR1-212ENST00000464381 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
NCOR1-212ENST00000464381 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
NCOR1-212ENST00000464381 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
NCOR1-212ENST00000464381 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
NCOR1-212ENST00000464381 NUP160Q12769 1436 aa12.57□□□□□ -0.4
NCOR1-212ENST00000464381 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
NCOR1-212ENST00000464381 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
NCOR1-212ENST00000464381 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
NCOR1-212ENST00000464381 KIF21BO75037 1637 aa12.52□□□□□ -0.41
NCOR1-212ENST00000464381 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
NCOR1-212ENST00000464381 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms