RNA–Protein interactions for RNA: ENST00000463923.5

ECHDC2-205, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 663 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-205ENST00000463923 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
ECHDC2-205ENST00000463923 ABCC9O60706 1549 aa29.04■■■□□ 2.24
ECHDC2-205ENST00000463923 CCDC180Q9P1Z9 1646 aa28.46■■■□□ 2.15
ECHDC2-205ENST00000463923 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
ECHDC2-205ENST00000463923 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
ECHDC2-205ENST00000463923 NACADO15069 1562 aa27.04■■□□□ 1.92
ECHDC2-205ENST00000463923 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.927e-7■□□□□ 10.8
ECHDC2-205ENST00000463923 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
ECHDC2-205ENST00000463923 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
ECHDC2-205ENST00000463923 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
ECHDC2-205ENST00000463923 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
ECHDC2-205ENST00000463923 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
ECHDC2-205ENST00000463923 CC2D2AQ9P2K1 1620 aa26.16■■□□□ 1.78
ECHDC2-205ENST00000463923 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
ECHDC2-205ENST00000463923 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
ECHDC2-205ENST00000463923 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
ECHDC2-205ENST00000463923 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
ECHDC2-205ENST00000463923 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
ECHDC2-205ENST00000463923 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
ECHDC2-205ENST00000463923 CUX2O14529 1486 aa25.12■■□□□ 1.61
ECHDC2-205ENST00000463923 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
ECHDC2-205ENST00000463923 NCAPD3P42695 1498 aa25■■□□□ 1.59
ECHDC2-205ENST00000463923 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
ECHDC2-205ENST00000463923 NESP48681 1621 aa24.83■■□□□ 1.57
ECHDC2-205ENST00000463923 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
ECHDC2-205ENST00000463923 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
ECHDC2-205ENST00000463923 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
ECHDC2-205ENST00000463923 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
ECHDC2-205ENST00000463923 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
ECHDC2-205ENST00000463923 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
ECHDC2-205ENST00000463923 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
ECHDC2-205ENST00000463923 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
ECHDC2-205ENST00000463923 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
ECHDC2-205ENST00000463923 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
ECHDC2-205ENST00000463923 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
ECHDC2-205ENST00000463923 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
ECHDC2-205ENST00000463923 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
ECHDC2-205ENST00000463923 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
ECHDC2-205ENST00000463923 WDR62O43379 1518 aa24.15■■□□□ 1.46
ECHDC2-205ENST00000463923 WIZO95785 1651 aa24.05■■□□□ 1.44
ECHDC2-205ENST00000463923 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
ECHDC2-205ENST00000463923 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
ECHDC2-205ENST00000463923 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
ECHDC2-205ENST00000463923 CFTRP13569 1480 aa23.86■■□□□ 1.41
ECHDC2-205ENST00000463923 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
ECHDC2-205ENST00000463923 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
ECHDC2-205ENST00000463923 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
ECHDC2-205ENST00000463923 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
ECHDC2-205ENST00000463923 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
ECHDC2-205ENST00000463923 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
ECHDC2-205ENST00000463923 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
ECHDC2-205ENST00000463923 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
ECHDC2-205ENST00000463923 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
ECHDC2-205ENST00000463923 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
ECHDC2-205ENST00000463923 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
ECHDC2-205ENST00000463923 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
ECHDC2-205ENST00000463923 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
ECHDC2-205ENST00000463923 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
ECHDC2-205ENST00000463923 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.333e-6■■■■□ 20.3
ECHDC2-205ENST00000463923 TRHP20396 242 aaPredicted RBP23.36■■□□□ 1.33
ECHDC2-205ENST00000463923 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
ECHDC2-205ENST00000463923 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
ECHDC2-205ENST00000463923 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
ECHDC2-205ENST00000463923 FBLN2P98095 1184 aa23.32■■□□□ 1.32
ECHDC2-205ENST00000463923 CHD1O14646 1710 aa23.32■■□□□ 1.32
ECHDC2-205ENST00000463923 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
ECHDC2-205ENST00000463923 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
ECHDC2-205ENST00000463923 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
ECHDC2-205ENST00000463923 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
ECHDC2-205ENST00000463923 SOGA1O94964 1423 aa23.1■■□□□ 1.29
ECHDC2-205ENST00000463923 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
ECHDC2-205ENST00000463923 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
ECHDC2-205ENST00000463923 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
ECHDC2-205ENST00000463923 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
ECHDC2-205ENST00000463923 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
ECHDC2-205ENST00000463923 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
ECHDC2-205ENST00000463923 MAGI1Q96QZ7 1491 aaPredicted RBP22.95■■□□□ 1.26
ECHDC2-205ENST00000463923 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
ECHDC2-205ENST00000463923 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
ECHDC2-205ENST00000463923 CUX1P39880 1505 aa22.92■■□□□ 1.26
ECHDC2-205ENST00000463923 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
ECHDC2-205ENST00000463923 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
ECHDC2-205ENST00000463923 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
ECHDC2-205ENST00000463923 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
ECHDC2-205ENST00000463923 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
ECHDC2-205ENST00000463923 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
ECHDC2-205ENST00000463923 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
ECHDC2-205ENST00000463923 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
ECHDC2-205ENST00000463923 NUP160Q12769 1436 aa22.57■■□□□ 1.2
ECHDC2-205ENST00000463923 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
ECHDC2-205ENST00000463923 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
ECHDC2-205ENST00000463923 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
ECHDC2-205ENST00000463923 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
ECHDC2-205ENST00000463923 KIF13AQ9H1H9 1805 aa22.44■■□□□ 1.18
ECHDC2-205ENST00000463923 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
ECHDC2-205ENST00000463923 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
ECHDC2-205ENST00000463923 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
ECHDC2-205ENST00000463923 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
ECHDC2-205ENST00000463923 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
ECHDC2-205ENST00000463923 JPH4Q96JJ6 628 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms