RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 NISCHQ9Y2I1 1504 aa38.2■■■■□ 3.71
SREBF2-205ENST00000463741 ABCC9O60706 1549 aa34.65■■■■□ 3.14
SREBF2-205ENST00000463741 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
SREBF2-205ENST00000463741 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
SREBF2-205ENST00000463741 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
SREBF2-205ENST00000463741 NACADO15069 1562 aa32.56■■■□□ 2.8
SREBF2-205ENST00000463741 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
SREBF2-205ENST00000463741 PABPN1Q86U42 306 aaKnown RBP eCLIP32.18■■■□□ 2.74
SREBF2-205ENST00000463741 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
SREBF2-205ENST00000463741 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
SREBF2-205ENST00000463741 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
SREBF2-205ENST00000463741 ZCCHC6Q5VYS8 1495 aaKnown RBP31.64■■■□□ 2.66
SREBF2-205ENST00000463741 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
SREBF2-205ENST00000463741 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
SREBF2-205ENST00000463741 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
SREBF2-205ENST00000463741 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
SREBF2-205ENST00000463741 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
SREBF2-205ENST00000463741 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
SREBF2-205ENST00000463741 DNAJC5Q9H3Z4 198 aa30.1■■■□□ 2.41
SREBF2-205ENST00000463741 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
SREBF2-205ENST00000463741 ERCC6Q03468 1493 aa29.95■■■□□ 2.39
SREBF2-205ENST00000463741 CUX2O14529 1486 aa29.93■■■□□ 2.38
SREBF2-205ENST00000463741 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
SREBF2-205ENST00000463741 SMARCA4P51532 1647 aa29.89■■■□□ 2.37
SREBF2-205ENST00000463741 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
SREBF2-205ENST00000463741 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
SREBF2-205ENST00000463741 NESP48681 1621 aa29.7■■■□□ 2.34
SREBF2-205ENST00000463741 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
SREBF2-205ENST00000463741 BAZ1BQ9UIG0 1483 aaKnown RBP29.67■■■□□ 2.34
SREBF2-205ENST00000463741 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
SREBF2-205ENST00000463741 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
SREBF2-205ENST00000463741 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
SREBF2-205ENST00000463741 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
SREBF2-205ENST00000463741 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
SREBF2-205ENST00000463741 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
SREBF2-205ENST00000463741 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
SREBF2-205ENST00000463741 WIZO95785 1651 aa29.12■■■□□ 2.25
SREBF2-205ENST00000463741 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
SREBF2-205ENST00000463741 WDR62O43379 1518 aa28.99■■■□□ 2.23
SREBF2-205ENST00000463741 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
SREBF2-205ENST00000463741 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
SREBF2-205ENST00000463741 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
SREBF2-205ENST00000463741 CFTRP13569 1480 aa28.75■■■□□ 2.19
SREBF2-205ENST00000463741 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
SREBF2-205ENST00000463741 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
SREBF2-205ENST00000463741 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
SREBF2-205ENST00000463741 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
SREBF2-205ENST00000463741 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
SREBF2-205ENST00000463741 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
SREBF2-205ENST00000463741 IFT140Q96RY7 1462 aa28.3■■■□□ 2.12
SREBF2-205ENST00000463741 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
SREBF2-205ENST00000463741 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
SREBF2-205ENST00000463741 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
SREBF2-205ENST00000463741 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
SREBF2-205ENST00000463741 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
SREBF2-205ENST00000463741 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
SREBF2-205ENST00000463741 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
SREBF2-205ENST00000463741 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
SREBF2-205ENST00000463741 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
SREBF2-205ENST00000463741 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
SREBF2-205ENST00000463741 CHD1O14646 1710 aa28.01■■■□□ 2.07
SREBF2-205ENST00000463741 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.079e-9■■■■■ 31.6
SREBF2-205ENST00000463741 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.07
SREBF2-205ENST00000463741 FBLN2P98095 1184 aa27.87■■■□□ 2.05
SREBF2-205ENST00000463741 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
SREBF2-205ENST00000463741 CYB5RLQ6IPT4 315 aa27.85■■■□□ 2.05
SREBF2-205ENST00000463741 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
SREBF2-205ENST00000463741 SOGA1O94964 1423 aa27.79■■■□□ 2.04
SREBF2-205ENST00000463741 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
SREBF2-205ENST00000463741 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
SREBF2-205ENST00000463741 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
SREBF2-205ENST00000463741 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
SREBF2-205ENST00000463741 CUX1P39880 1505 aa27.69■■■□□ 2.02
SREBF2-205ENST00000463741 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
SREBF2-205ENST00000463741 TRHP20396 242 aaPredicted RBP27.64■■■□□ 2.02
SREBF2-205ENST00000463741 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
SREBF2-205ENST00000463741 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
SREBF2-205ENST00000463741 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
SREBF2-205ENST00000463741 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
SREBF2-205ENST00000463741 SYNJ2O15056 1496 aa27.54■■■□□ 2
SREBF2-205ENST00000463741 PBRM1Q86U86 1689 aa27.54■■■□□ 2
SREBF2-205ENST00000463741 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
SREBF2-205ENST00000463741 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
SREBF2-205ENST00000463741 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
SREBF2-205ENST00000463741 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
SREBF2-205ENST00000463741 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
SREBF2-205ENST00000463741 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
SREBF2-205ENST00000463741 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
SREBF2-205ENST00000463741 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
SREBF2-205ENST00000463741 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
SREBF2-205ENST00000463741 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
SREBF2-205ENST00000463741 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
SREBF2-205ENST00000463741 NUP160Q12769 1436 aa27.15■■□□□ 1.94
SREBF2-205ENST00000463741 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
SREBF2-205ENST00000463741 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
SREBF2-205ENST00000463741 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
SREBF2-205ENST00000463741 AEBP2Q6ZN18 517 aaPredicted RBP27■■□□□ 1.91
SREBF2-205ENST00000463741 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
SREBF2-205ENST00000463741 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.89
SREBF2-205ENST00000463741 KIF13AQ9H1H9 1805 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms