RNA–Protein interactions for RNA: ENST00000463386.1

SATB2-207, Transcript of SATB homeobox 2, humanhuman

TSL 4

Gene SATB2, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-207ENST00000463386 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.121e-11■■■■■ 27.3
SATB2-207ENST00000463386 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.474e-11■■■■■ 67.9
SATB2-207ENST00000463386 NKRFO15226 690 aaKnown RBP eCLIP12.77□□□□□ -0.374e-11■■□□□ 14.5
SATB2-207ENST00000463386 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.723e-10■□□□□ 9.6
SATB2-207ENST00000463386 SF3B4Q15427 424 aaKnown RBP eCLIP9.99□□□□□ -0.817e-10■■■■■ 43.5
SATB2-207ENST00000463386 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.637e-9■■■■□ 21.2
SATB2-207ENST00000463386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.591e-8■■■■□ 26.5
SATB2-207ENST00000463386 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.381e-8■■■■■ 28.3
SATB2-207ENST00000463386 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.461e-8■■■■□ 24.6
SATB2-207ENST00000463386 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.752e-8■■■■□ 19.7
SATB2-207ENST00000463386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.32□□□□□ -0.764e-8■■■□□ 19
SATB2-207ENST00000463386 ILF3Q12906 894 aaKnown RBP eCLIP10.9□□□□□ -0.667e-8■■□□□ 13.2
SATB2-207ENST00000463386 RBM15Q96T37 977 aaKnown RBP eCLIP10.98□□□□□ -0.651e-7■■■□□ 15.4
SATB2-207ENST00000463386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.461e-7■■■□□ 17.5
SATB2-207ENST00000463386 PCBP2Q15366 365 aaKnown RBP eCLIP10.15□□□□□ -0.782e-7■■■■□ 23.4
SATB2-207ENST00000463386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.94□□□□□ -0.663e-7■■□□□ 11.4
SATB2-207ENST00000463386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.564e-7■■■■■ 57.7
SATB2-207ENST00000463386 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.78□□□□□ -0.844e-7■■■□□ 16.2
SATB2-207ENST00000463386 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■□□□□ 10.6
SATB2-207ENST00000463386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.315e-7■■■■■ 29.8
SATB2-207ENST00000463386 LARP4Q71RC2 724 aaKnown RBP eCLIP9.94□□□□□ -0.826e-7■■■■□ 26
SATB2-207ENST00000463386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.497e-7■□□□□ 8.5
SATB2-207ENST00000463386 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■□□□□ 10.5
SATB2-207ENST00000463386 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■■■ 39.1
SATB2-207ENST00000463386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.27□□□□□ -0.612e-6■■■■■ 46.3
SATB2-207ENST00000463386 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■□□□□ 11.1
SATB2-207ENST00000463386 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■□□ 18.2
SATB2-207ENST00000463386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■□□□ 13.7
SATB2-207ENST00000463386 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.747e-6■■■■■ 73
Retrieved 29 of 29 RNA–protein pairs in 7.8 ms