RNA–Protein interactions for RNA: ENST00000463307.5

BUD23-213, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 1 (best)

Gene BUD23, Length 1,815 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-213ENST00000463307 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
BUD23-213ENST00000463307 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
BUD23-213ENST00000463307 ABCC9O60706 1549 aa27.56■■■□□ 2
BUD23-213ENST00000463307 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.81
BUD23-213ENST00000463307 NACADO15069 1562 aa26.28■■□□□ 1.8
BUD23-213ENST00000463307 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
BUD23-213ENST00000463307 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
BUD23-213ENST00000463307 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
BUD23-213ENST00000463307 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
BUD23-213ENST00000463307 UNC13AQ9UPW8 1703 aa25.73■■□□□ 1.71
BUD23-213ENST00000463307 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.76e-6■■□□□ 12
BUD23-213ENST00000463307 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
BUD23-213ENST00000463307 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
BUD23-213ENST00000463307 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
BUD23-213ENST00000463307 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
BUD23-213ENST00000463307 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
BUD23-213ENST00000463307 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.59
BUD23-213ENST00000463307 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
BUD23-213ENST00000463307 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
BUD23-213ENST00000463307 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
BUD23-213ENST00000463307 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
BUD23-213ENST00000463307 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
BUD23-213ENST00000463307 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
BUD23-213ENST00000463307 HRCP23327 699 aa24.16■■□□□ 1.46
BUD23-213ENST00000463307 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
BUD23-213ENST00000463307 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.46
BUD23-213ENST00000463307 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
BUD23-213ENST00000463307 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
BUD23-213ENST00000463307 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
BUD23-213ENST00000463307 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
BUD23-213ENST00000463307 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
BUD23-213ENST00000463307 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
BUD23-213ENST00000463307 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
BUD23-213ENST00000463307 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
BUD23-213ENST00000463307 CUX2O14529 1486 aa23.75■■□□□ 1.39
BUD23-213ENST00000463307 NESP48681 1621 aa23.74■■□□□ 1.39
BUD23-213ENST00000463307 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
BUD23-213ENST00000463307 WIZO95785 1651 aa23.64■■□□□ 1.38
BUD23-213ENST00000463307 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
BUD23-213ENST00000463307 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
BUD23-213ENST00000463307 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
BUD23-213ENST00000463307 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
BUD23-213ENST00000463307 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
BUD23-213ENST00000463307 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
BUD23-213ENST00000463307 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
BUD23-213ENST00000463307 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
BUD23-213ENST00000463307 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
BUD23-213ENST00000463307 CFTRP13569 1480 aa23.3■■□□□ 1.32
BUD23-213ENST00000463307 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
BUD23-213ENST00000463307 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
BUD23-213ENST00000463307 WDR62O43379 1518 aa23.25■■□□□ 1.31
BUD23-213ENST00000463307 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
BUD23-213ENST00000463307 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
BUD23-213ENST00000463307 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
BUD23-213ENST00000463307 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
BUD23-213ENST00000463307 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
BUD23-213ENST00000463307 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
BUD23-213ENST00000463307 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.24
BUD23-213ENST00000463307 ABCC8Q09428 1581 aa22.83■■□□□ 1.24
BUD23-213ENST00000463307 EEA1Q15075 1411 aa22.82■■□□□ 1.24
BUD23-213ENST00000463307 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
BUD23-213ENST00000463307 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
BUD23-213ENST00000463307 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
BUD23-213ENST00000463307 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
BUD23-213ENST00000463307 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
BUD23-213ENST00000463307 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
BUD23-213ENST00000463307 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
BUD23-213ENST00000463307 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
BUD23-213ENST00000463307 SOGA1O94964 1423 aa22.62■■□□□ 1.21
BUD23-213ENST00000463307 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
BUD23-213ENST00000463307 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
BUD23-213ENST00000463307 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.21
BUD23-213ENST00000463307 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.21
BUD23-213ENST00000463307 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
BUD23-213ENST00000463307 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.192e-7■■■■■ 31.1
BUD23-213ENST00000463307 CUX1P39880 1505 aa22.5■■□□□ 1.19
BUD23-213ENST00000463307 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
BUD23-213ENST00000463307 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
BUD23-213ENST00000463307 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
BUD23-213ENST00000463307 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
BUD23-213ENST00000463307 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
BUD23-213ENST00000463307 KIF21BO75037 1637 aa22.43■■□□□ 1.18
BUD23-213ENST00000463307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
BUD23-213ENST00000463307 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
BUD23-213ENST00000463307 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
BUD23-213ENST00000463307 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
BUD23-213ENST00000463307 CHD1O14646 1710 aa22.34■■□□□ 1.17
BUD23-213ENST00000463307 RIMBP3CA6NJZ7 1639 aa22.32■■□□□ 1.16
BUD23-213ENST00000463307 RIMBP3BA6NNM3 1639 aa22.32■■□□□ 1.16
BUD23-213ENST00000463307 RIMBP3Q9UFD9 1639 aa22.32■■□□□ 1.16
BUD23-213ENST00000463307 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
BUD23-213ENST00000463307 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
BUD23-213ENST00000463307 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
BUD23-213ENST00000463307 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
BUD23-213ENST00000463307 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
BUD23-213ENST00000463307 FBLN2P98095 1184 aa22.27■■□□□ 1.15
BUD23-213ENST00000463307 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
BUD23-213ENST00000463307 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
BUD23-213ENST00000463307 CLIP1P30622 1438 aa22.21■■□□□ 1.15
BUD23-213ENST00000463307 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms