RNA–Protein interactions for RNA: ENST00000463238.1

FAM53A-203, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-203ENST00000463238 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
FAM53A-203ENST00000463238 ABCC9O60706 1549 aa34.04■■■■□ 3.04
FAM53A-203ENST00000463238 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
FAM53A-203ENST00000463238 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
FAM53A-203ENST00000463238 NACADO15069 1562 aa32.12■■■□□ 2.73
FAM53A-203ENST00000463238 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
FAM53A-203ENST00000463238 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
FAM53A-203ENST00000463238 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
FAM53A-203ENST00000463238 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
FAM53A-203ENST00000463238 UNC13AQ9UPW8 1703 aa31.51■■■□□ 2.63
FAM53A-203ENST00000463238 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
FAM53A-203ENST00000463238 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
FAM53A-203ENST00000463238 DCAF1Q9Y4B6 1507 aa31.15■■■□□ 2.58
FAM53A-203ENST00000463238 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
FAM53A-203ENST00000463238 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
FAM53A-203ENST00000463238 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
FAM53A-203ENST00000463238 CECR2Q9BXF3 1484 aa30.72■■■□□ 2.51
FAM53A-203ENST00000463238 EIF4G1Q04637 1599 aaKnown RBP30.65■■■□□ 2.5
FAM53A-203ENST00000463238 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
FAM53A-203ENST00000463238 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
FAM53A-203ENST00000463238 CUX2O14529 1486 aa29.5■■■□□ 2.31
FAM53A-203ENST00000463238 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
FAM53A-203ENST00000463238 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
FAM53A-203ENST00000463238 SMARCA2P51531 1590 aa29.46■■■□□ 2.31
FAM53A-203ENST00000463238 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
FAM53A-203ENST00000463238 SMARCA4P51532 1647 aa29.41■■■□□ 2.3
FAM53A-203ENST00000463238 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
FAM53A-203ENST00000463238 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
FAM53A-203ENST00000463238 NESP48681 1621 aa29.16■■■□□ 2.26
FAM53A-203ENST00000463238 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
FAM53A-203ENST00000463238 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.24
FAM53A-203ENST00000463238 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
FAM53A-203ENST00000463238 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
FAM53A-203ENST00000463238 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
FAM53A-203ENST00000463238 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
FAM53A-203ENST00000463238 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
FAM53A-203ENST00000463238 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
FAM53A-203ENST00000463238 WIZO95785 1651 aa28.6■■■□□ 2.17
FAM53A-203ENST00000463238 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
FAM53A-203ENST00000463238 WDR62O43379 1518 aa28.53■■■□□ 2.16
FAM53A-203ENST00000463238 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
FAM53A-203ENST00000463238 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
FAM53A-203ENST00000463238 CFTRP13569 1480 aa28.36■■■□□ 2.13
FAM53A-203ENST00000463238 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
FAM53A-203ENST00000463238 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
FAM53A-203ENST00000463238 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
FAM53A-203ENST00000463238 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
FAM53A-203ENST00000463238 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
FAM53A-203ENST00000463238 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
FAM53A-203ENST00000463238 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
FAM53A-203ENST00000463238 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
FAM53A-203ENST00000463238 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
FAM53A-203ENST00000463238 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
FAM53A-203ENST00000463238 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
FAM53A-203ENST00000463238 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.02
FAM53A-203ENST00000463238 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.02
FAM53A-203ENST00000463238 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.02
FAM53A-203ENST00000463238 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
FAM53A-203ENST00000463238 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
FAM53A-203ENST00000463238 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
FAM53A-203ENST00000463238 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 2
FAM53A-203ENST00000463238 POLA1P09884 1462 aaPredicted RBP27.53■■■□□ 2
FAM53A-203ENST00000463238 CHD1O14646 1710 aa27.46■■□□□ 1.99
FAM53A-203ENST00000463238 FBLN2P98095 1184 aa27.45■■□□□ 1.98
FAM53A-203ENST00000463238 CYB5RLQ6IPT4 315 aa27.43■■□□□ 1.98
FAM53A-203ENST00000463238 SOGA1O94964 1423 aa27.42■■□□□ 1.98
FAM53A-203ENST00000463238 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
FAM53A-203ENST00000463238 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
FAM53A-203ENST00000463238 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
FAM53A-203ENST00000463238 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
FAM53A-203ENST00000463238 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
FAM53A-203ENST00000463238 SNAPC4Q5SXM2 1469 aa27.29■■□□□ 1.96
FAM53A-203ENST00000463238 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
FAM53A-203ENST00000463238 TRHP20396 242 aaPredicted RBP27.25■■□□□ 1.95
FAM53A-203ENST00000463238 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
FAM53A-203ENST00000463238 CUX1P39880 1505 aa27.25■■□□□ 1.95
FAM53A-203ENST00000463238 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
FAM53A-203ENST00000463238 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
FAM53A-203ENST00000463238 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
FAM53A-203ENST00000463238 CLASP1Q7Z460 1538 aa27.19■■□□□ 1.94
FAM53A-203ENST00000463238 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
FAM53A-203ENST00000463238 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
FAM53A-203ENST00000463238 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
FAM53A-203ENST00000463238 ABCA10Q8WWZ4 1543 aa27.03■■□□□ 1.92
FAM53A-203ENST00000463238 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
FAM53A-203ENST00000463238 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
FAM53A-203ENST00000463238 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
FAM53A-203ENST00000463238 GRIN2AQ12879 1464 aa26.85■■□□□ 1.89
FAM53A-203ENST00000463238 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
FAM53A-203ENST00000463238 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
FAM53A-203ENST00000463238 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
FAM53A-203ENST00000463238 NUP160Q12769 1436 aa26.77■■□□□ 1.88
FAM53A-203ENST00000463238 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
FAM53A-203ENST00000463238 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
FAM53A-203ENST00000463238 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
FAM53A-203ENST00000463238 ERCC6L2Q5T890 1561 aa26.68■■□□□ 1.86
FAM53A-203ENST00000463238 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
FAM53A-203ENST00000463238 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
FAM53A-203ENST00000463238 JPH4Q96JJ6 628 aa26.51■■□□□ 1.83
FAM53A-203ENST00000463238 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms