RNA–Protein interactions for RNA: ENST00000462708.1

GNL1-203, Transcript of G protein nucleolar 1 (putative), humanhuman

TSL 2

Gene GNL1, Length 774 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL1-203ENST00000462708 NISCHQ9Y2I1 1504 aa20.8■□□□□ 0.92
GNL1-203ENST00000462708 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
GNL1-203ENST00000462708 ABCC9O60706 1549 aa18.59■□□□□ 0.57
GNL1-203ENST00000462708 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
GNL1-203ENST00000462708 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
GNL1-203ENST00000462708 NACADO15069 1562 aa17.76■□□□□ 0.43
GNL1-203ENST00000462708 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
GNL1-203ENST00000462708 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
GNL1-203ENST00000462708 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
GNL1-203ENST00000462708 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
GNL1-203ENST00000462708 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
GNL1-203ENST00000462708 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
GNL1-203ENST00000462708 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
GNL1-203ENST00000462708 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■□□□ 14.5
GNL1-203ENST00000462708 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
GNL1-203ENST00000462708 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
GNL1-203ENST00000462708 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
GNL1-203ENST00000462708 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
GNL1-203ENST00000462708 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
GNL1-203ENST00000462708 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
GNL1-203ENST00000462708 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
GNL1-203ENST00000462708 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
GNL1-203ENST00000462708 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
GNL1-203ENST00000462708 CUX2O14529 1486 aa16.29■□□□□ 0.2
GNL1-203ENST00000462708 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
GNL1-203ENST00000462708 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
GNL1-203ENST00000462708 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
GNL1-203ENST00000462708 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
GNL1-203ENST00000462708 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
GNL1-203ENST00000462708 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
GNL1-203ENST00000462708 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
GNL1-203ENST00000462708 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
GNL1-203ENST00000462708 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
GNL1-203ENST00000462708 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.14
GNL1-203ENST00000462708 NESP48681 1621 aa15.94■□□□□ 0.14
GNL1-203ENST00000462708 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
GNL1-203ENST00000462708 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
GNL1-203ENST00000462708 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
GNL1-203ENST00000462708 WIZO95785 1651 aa15.81■□□□□ 0.12
GNL1-203ENST00000462708 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
GNL1-203ENST00000462708 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
GNL1-203ENST00000462708 WDR62O43379 1518 aa15.73■□□□□ 0.11
GNL1-203ENST00000462708 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
GNL1-203ENST00000462708 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
GNL1-203ENST00000462708 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
GNL1-203ENST00000462708 CFTRP13569 1480 aa15.62■□□□□ 0.09
GNL1-203ENST00000462708 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
GNL1-203ENST00000462708 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
GNL1-203ENST00000462708 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
GNL1-203ENST00000462708 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
GNL1-203ENST00000462708 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
GNL1-203ENST00000462708 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
GNL1-203ENST00000462708 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
GNL1-203ENST00000462708 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
GNL1-203ENST00000462708 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
GNL1-203ENST00000462708 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
GNL1-203ENST00000462708 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
GNL1-203ENST00000462708 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
GNL1-203ENST00000462708 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
GNL1-203ENST00000462708 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
GNL1-203ENST00000462708 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
GNL1-203ENST00000462708 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
GNL1-203ENST00000462708 CHD1O14646 1710 aa15.2■□□□□ 0.02
GNL1-203ENST00000462708 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
GNL1-203ENST00000462708 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
GNL1-203ENST00000462708 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
GNL1-203ENST00000462708 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
GNL1-203ENST00000462708 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 04e-8■■■■■ 48.4
GNL1-203ENST00000462708 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
GNL1-203ENST00000462708 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
GNL1-203ENST00000462708 SOGA1O94964 1423 aa15.04■□□□□ -0
GNL1-203ENST00000462708 PBRM1Q86U86 1689 aa15.03■□□□□ -0
GNL1-203ENST00000462708 CUX1P39880 1505 aa15.02■□□□□ -0
GNL1-203ENST00000462708 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
GNL1-203ENST00000462708 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
GNL1-203ENST00000462708 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
GNL1-203ENST00000462708 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
GNL1-203ENST00000462708 SNAPC4Q5SXM2 1469 aa14.98□□□□□ -0.01
GNL1-203ENST00000462708 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
GNL1-203ENST00000462708 TDRD9Q8NDG6 1382 aaKnown RBP14.95□□□□□ -0.02
GNL1-203ENST00000462708 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
GNL1-203ENST00000462708 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
GNL1-203ENST00000462708 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
GNL1-203ENST00000462708 FBLN2P98095 1184 aa14.92□□□□□ -0.02
GNL1-203ENST00000462708 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
GNL1-203ENST00000462708 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
GNL1-203ENST00000462708 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
GNL1-203ENST00000462708 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
GNL1-203ENST00000462708 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
GNL1-203ENST00000462708 ADAMTS12P58397 1594 aa14.83□□□□□ -0.04
GNL1-203ENST00000462708 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
GNL1-203ENST00000462708 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
GNL1-203ENST00000462708 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
GNL1-203ENST00000462708 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
GNL1-203ENST00000462708 NUP160Q12769 1436 aa14.74□□□□□ -0.05
GNL1-203ENST00000462708 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
GNL1-203ENST00000462708 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
GNL1-203ENST00000462708 CUL7Q14999 1698 aa14.63□□□□□ -0.07
GNL1-203ENST00000462708 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
GNL1-203ENST00000462708 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms