RNA–Protein interactions for RNA: ENST00000461915.5

SKIV2L-203, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 691 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-203ENST00000461915 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SKIV2L-203ENST00000461915 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
SKIV2L-203ENST00000461915 ABCC9O60706 1549 aa23.08■■□□□ 1.29
SKIV2L-203ENST00000461915 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
SKIV2L-203ENST00000461915 NACADO15069 1562 aa22.4■■□□□ 1.18
SKIV2L-203ENST00000461915 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
SKIV2L-203ENST00000461915 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
SKIV2L-203ENST00000461915 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
SKIV2L-203ENST00000461915 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
SKIV2L-203ENST00000461915 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
SKIV2L-203ENST00000461915 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
SKIV2L-203ENST00000461915 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
SKIV2L-203ENST00000461915 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
SKIV2L-203ENST00000461915 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
SKIV2L-203ENST00000461915 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.97
SKIV2L-203ENST00000461915 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
SKIV2L-203ENST00000461915 CC2D2AQ9P2K1 1620 aa20.94■□□□□ 0.94
SKIV2L-203ENST00000461915 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
SKIV2L-203ENST00000461915 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
SKIV2L-203ENST00000461915 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
SKIV2L-203ENST00000461915 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
SKIV2L-203ENST00000461915 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
SKIV2L-203ENST00000461915 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
SKIV2L-203ENST00000461915 ATAD2BQ9ULI0 1458 aa20.65■□□□□ 0.9
SKIV2L-203ENST00000461915 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
SKIV2L-203ENST00000461915 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
SKIV2L-203ENST00000461915 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
SKIV2L-203ENST00000461915 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
SKIV2L-203ENST00000461915 WIZO95785 1651 aa20.46■□□□□ 0.87
SKIV2L-203ENST00000461915 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
SKIV2L-203ENST00000461915 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
SKIV2L-203ENST00000461915 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
SKIV2L-203ENST00000461915 NESP48681 1621 aa20.02■□□□□ 0.79
SKIV2L-203ENST00000461915 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
SKIV2L-203ENST00000461915 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
SKIV2L-203ENST00000461915 CFTRP13569 1480 aa19.96■□□□□ 0.79
SKIV2L-203ENST00000461915 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
SKIV2L-203ENST00000461915 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
SKIV2L-203ENST00000461915 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
SKIV2L-203ENST00000461915 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
SKIV2L-203ENST00000461915 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
SKIV2L-203ENST00000461915 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
SKIV2L-203ENST00000461915 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
SKIV2L-203ENST00000461915 CUX2O14529 1486 aa19.72■□□□□ 0.75
SKIV2L-203ENST00000461915 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SKIV2L-203ENST00000461915 WDR62O43379 1518 aa19.66■□□□□ 0.74
SKIV2L-203ENST00000461915 URB2Q14146 1524 aaKnown RBP19.57■□□□□ 0.72
SKIV2L-203ENST00000461915 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
SKIV2L-203ENST00000461915 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
SKIV2L-203ENST00000461915 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
SKIV2L-203ENST00000461915 CUX1P39880 1505 aa19.41■□□□□ 0.7
SKIV2L-203ENST00000461915 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
SKIV2L-203ENST00000461915 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
SKIV2L-203ENST00000461915 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
SKIV2L-203ENST00000461915 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
SKIV2L-203ENST00000461915 TOP2BQ02880 1626 aa19.33■□□□□ 0.68
SKIV2L-203ENST00000461915 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
SKIV2L-203ENST00000461915 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
SKIV2L-203ENST00000461915 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
SKIV2L-203ENST00000461915 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
SKIV2L-203ENST00000461915 SOGA1O94964 1423 aa19.24■□□□□ 0.67
SKIV2L-203ENST00000461915 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
SKIV2L-203ENST00000461915 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
SKIV2L-203ENST00000461915 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SKIV2L-203ENST00000461915 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
SKIV2L-203ENST00000461915 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■■■□□ 19
SKIV2L-203ENST00000461915 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
SKIV2L-203ENST00000461915 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
SKIV2L-203ENST00000461915 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
SKIV2L-203ENST00000461915 GRIN2BQ13224 1484 aa19.04■□□□□ 0.64
SKIV2L-203ENST00000461915 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
SKIV2L-203ENST00000461915 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
SKIV2L-203ENST00000461915 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SKIV2L-203ENST00000461915 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
SKIV2L-203ENST00000461915 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
SKIV2L-203ENST00000461915 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
SKIV2L-203ENST00000461915 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
SKIV2L-203ENST00000461915 CHD1O14646 1710 aa18.9■□□□□ 0.62
SKIV2L-203ENST00000461915 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
SKIV2L-203ENST00000461915 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
SKIV2L-203ENST00000461915 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
SKIV2L-203ENST00000461915 CUL7Q14999 1698 aa18.84■□□□□ 0.61
SKIV2L-203ENST00000461915 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
SKIV2L-203ENST00000461915 FBLN2P98095 1184 aa18.8■□□□□ 0.6
SKIV2L-203ENST00000461915 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
SKIV2L-203ENST00000461915 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
SKIV2L-203ENST00000461915 IGF1RP08069 1367 aa18.8■□□□□ 0.6
SKIV2L-203ENST00000461915 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
SKIV2L-203ENST00000461915 EEA1Q15075 1411 aa18.74■□□□□ 0.59
SKIV2L-203ENST00000461915 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
SKIV2L-203ENST00000461915 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
SKIV2L-203ENST00000461915 NUP160Q12769 1436 aa18.72■□□□□ 0.59
SKIV2L-203ENST00000461915 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
SKIV2L-203ENST00000461915 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
SKIV2L-203ENST00000461915 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
SKIV2L-203ENST00000461915 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
SKIV2L-203ENST00000461915 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
SKIV2L-203ENST00000461915 ARHGEF11O15085 1522 aa18.58■□□□□ 0.56
SKIV2L-203ENST00000461915 SHROOM2Q13796 1616 aa18.57■□□□□ 0.56
SKIV2L-203ENST00000461915 KIAA0586Q9BVV6 1533 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms