RNA–Protein interactions for RNA: ENST00000461602.5

MRPL38-203, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 880 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-203ENST00000461602 NISCHQ9Y2I1 1504 aa45.56■■■■■ 4.88
MRPL38-203ENST00000461602 CCDC180Q9P1Z9 1646 aa40.6■■■■■ 4.09
MRPL38-203ENST00000461602 ABCC9O60706 1549 aa40.15■■■■■ 4.02
MRPL38-203ENST00000461602 RB1CC1Q8TDY2 1594 aa38.42■■■■□ 3.74
MRPL38-203ENST00000461602 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
MRPL38-203ENST00000461602 NACADO15069 1562 aa38.27■■■■□ 3.72
MRPL38-203ENST00000461602 MYO15BQ96JP2 1530 aa37.89■■■■□ 3.66
MRPL38-203ENST00000461602 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
MRPL38-203ENST00000461602 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
MRPL38-203ENST00000461602 PABPN1Q86U42 306 aaKnown RBP eCLIP37.5■■■■□ 3.59
MRPL38-203ENST00000461602 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
MRPL38-203ENST00000461602 BICRAQ9NZM4 1560 aa37.23■■■■□ 3.55
MRPL38-203ENST00000461602 DNAJC5BQ9UF47 199 aa37.11■■■■□ 3.53
MRPL38-203ENST00000461602 SCRIBQ14160 1630 aa37.1■■■■□ 3.53
MRPL38-203ENST00000461602 SHROOM4Q9ULL8 1493 aa36.79■■■■□ 3.48
MRPL38-203ENST00000461602 EIF4G1Q04637 1599 aaKnown RBP36.31■■■■□ 3.4
MRPL38-203ENST00000461602 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
MRPL38-203ENST00000461602 CECR2Q9BXF3 1484 aa36.08■■■■□ 3.37
MRPL38-203ENST00000461602 SMARCA4P51532 1647 aa35.41■■■■□ 3.26
MRPL38-203ENST00000461602 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
MRPL38-203ENST00000461602 NCAPD3P42695 1498 aa35.33■■■■□ 3.25
MRPL38-203ENST00000461602 ATAD2BQ9ULI0 1458 aa35.32■■■■□ 3.24
MRPL38-203ENST00000461602 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
MRPL38-203ENST00000461602 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
MRPL38-203ENST00000461602 HMGXB3Q12766 1538 aa35.11■■■■□ 3.21
MRPL38-203ENST00000461602 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
MRPL38-203ENST00000461602 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
MRPL38-203ENST00000461602 WIZO95785 1651 aa34.73■■■■□ 3.15
MRPL38-203ENST00000461602 ERCC6Q03468 1493 aa34.64■■■■□ 3.14
MRPL38-203ENST00000461602 NESP48681 1621 aa34.63■■■■□ 3.13
MRPL38-203ENST00000461602 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
MRPL38-203ENST00000461602 LAMC3Q9Y6N6 1575 aa34.45■■■■□ 3.1
MRPL38-203ENST00000461602 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
MRPL38-203ENST00000461602 CADPSQ9ULU8 1353 aa34.32■■■■□ 3.08
MRPL38-203ENST00000461602 CUX2O14529 1486 aa34.31■■■■□ 3.08
MRPL38-203ENST00000461602 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
MRPL38-203ENST00000461602 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
MRPL38-203ENST00000461602 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
MRPL38-203ENST00000461602 CFTRP13569 1480 aa34.01■■■■□ 3.04
MRPL38-203ENST00000461602 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
MRPL38-203ENST00000461602 FANCD2Q9BXW9 1451 aa33.93■■■■□ 3.02
MRPL38-203ENST00000461602 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
MRPL38-203ENST00000461602 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
MRPL38-203ENST00000461602 WDR62O43379 1518 aa33.79■■■■□ 3
MRPL38-203ENST00000461602 DNAJC5Q9H3Z4 198 aa33.67■■■□□ 2.98
MRPL38-203ENST00000461602 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
MRPL38-203ENST00000461602 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
MRPL38-203ENST00000461602 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
MRPL38-203ENST00000461602 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
MRPL38-203ENST00000461602 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
MRPL38-203ENST00000461602 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.91
MRPL38-203ENST00000461602 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
MRPL38-203ENST00000461602 ZNF608Q9ULD9 1512 aaPredicted RBP33.1■■■□□ 2.89
MRPL38-203ENST00000461602 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
MRPL38-203ENST00000461602 CUX1P39880 1505 aa32.97■■■□□ 2.87
MRPL38-203ENST00000461602 TARBP1Q13395 1621 aaKnown RBP32.96■■■□□ 2.87
MRPL38-203ENST00000461602 EIF4G3O43432 1585 aaKnown RBP32.93■■■□□ 2.86
MRPL38-203ENST00000461602 SOGA1O94964 1423 aa32.93■■■□□ 2.86
MRPL38-203ENST00000461602 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
MRPL38-203ENST00000461602 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
MRPL38-203ENST00000461602 OSCARQ8IYS5 282 aa32.9■■■□□ 2.86
MRPL38-203ENST00000461602 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.861e-6■■□□□ 12.5
MRPL38-203ENST00000461602 TDRD9Q8NDG6 1382 aaKnown RBP32.81■■■□□ 2.84
MRPL38-203ENST00000461602 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
MRPL38-203ENST00000461602 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
MRPL38-203ENST00000461602 FBLN2P98095 1184 aa32.65■■■□□ 2.82
MRPL38-203ENST00000461602 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
MRPL38-203ENST00000461602 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
MRPL38-203ENST00000461602 SNAPC4Q5SXM2 1469 aa32.57■■■□□ 2.8
MRPL38-203ENST00000461602 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
MRPL38-203ENST00000461602 BIVM-ERCC5R4GMW8 1640 aa32.56■■■□□ 2.8
MRPL38-203ENST00000461602 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
MRPL38-203ENST00000461602 CHD1O14646 1710 aa32.55■■■□□ 2.8
MRPL38-203ENST00000461602 TRIM41Q8WV44 630 aa32.53■■■□□ 2.8
MRPL38-203ENST00000461602 GAPVD1Q14C86 1478 aa32.53■■■□□ 2.8
MRPL38-203ENST00000461602 MAGI1Q96QZ7 1491 aaPredicted RBP32.48■■■□□ 2.79
MRPL38-203ENST00000461602 CHMP7Q8WUX9 453 aaPredicted RBP32.46■■■□□ 2.79
MRPL38-203ENST00000461602 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
MRPL38-203ENST00000461602 PBRM1Q86U86 1689 aa32.43■■■□□ 2.78
MRPL38-203ENST00000461602 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
MRPL38-203ENST00000461602 RIMBP3CA6NJZ7 1639 aa32.35■■■□□ 2.77
MRPL38-203ENST00000461602 RIMBP3BA6NNM3 1639 aa32.35■■■□□ 2.77
MRPL38-203ENST00000461602 RIMBP3Q9UFD9 1639 aa32.35■■■□□ 2.77
MRPL38-203ENST00000461602 ARHGEF11O15085 1522 aa32.33■■■□□ 2.77
MRPL38-203ENST00000461602 CLASP1Q7Z460 1538 aa32.2■■■□□ 2.74
MRPL38-203ENST00000461602 ADAMTS12P58397 1594 aa32.17■■■□□ 2.74
MRPL38-203ENST00000461602 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
MRPL38-203ENST00000461602 GRIN2AQ12879 1464 aa32.14■■■□□ 2.74
MRPL38-203ENST00000461602 FHAD1B1AJZ9 1412 aa32.13■■■□□ 2.73
MRPL38-203ENST00000461602 CYB5RLQ6IPT4 315 aa32.12■■■□□ 2.73
MRPL38-203ENST00000461602 ARAP1Q96P48 1450 aa32.04■■■□□ 2.72
MRPL38-203ENST00000461602 KIF27Q86VH2 1401 aa32.01■■■□□ 2.72
MRPL38-203ENST00000461602 NUP160Q12769 1436 aa31.98■■■□□ 2.71
MRPL38-203ENST00000461602 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
MRPL38-203ENST00000461602 IGF1RP08069 1367 aa31.91■■■□□ 2.7
MRPL38-203ENST00000461602 CUL7Q14999 1698 aa31.8■■■□□ 2.68
MRPL38-203ENST00000461602 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
MRPL38-203ENST00000461602 SHROOM2Q13796 1616 aa31.75■■■□□ 2.67
MRPL38-203ENST00000461602 CARMIL1Q5VZK9 1371 aa31.72■■■□□ 2.67
MRPL38-203ENST00000461602 JPH4Q96JJ6 628 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms