RNA–Protein interactions for RNA: ENST00000461364.1

SMIM7-203, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-203ENST00000461364 NISCHQ9Y2I1 1504 aa17.86■□□□□ 0.45
SMIM7-203ENST00000461364 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
SMIM7-203ENST00000461364 ABCC9O60706 1549 aa15.39■□□□□ 0.05
SMIM7-203ENST00000461364 NACADO15069 1562 aa14.98□□□□□ -0.01
SMIM7-203ENST00000461364 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
SMIM7-203ENST00000461364 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
SMIM7-203ENST00000461364 ZCCHC6Q5VYS8 1495 aaKnown RBP14.9□□□□□ -0.02
SMIM7-203ENST00000461364 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
SMIM7-203ENST00000461364 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
SMIM7-203ENST00000461364 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
SMIM7-203ENST00000461364 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
SMIM7-203ENST00000461364 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
SMIM7-203ENST00000461364 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
SMIM7-203ENST00000461364 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMIM7-203ENST00000461364 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
SMIM7-203ENST00000461364 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
SMIM7-203ENST00000461364 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
SMIM7-203ENST00000461364 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
SMIM7-203ENST00000461364 BAZ1AQ9NRL2 1556 aaPredicted RBP13.87□□□□□ -0.19
SMIM7-203ENST00000461364 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
SMIM7-203ENST00000461364 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
SMIM7-203ENST00000461364 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
SMIM7-203ENST00000461364 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
SMIM7-203ENST00000461364 HMGXB3Q12766 1538 aa13.76□□□□□ -0.21
SMIM7-203ENST00000461364 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
SMIM7-203ENST00000461364 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.21
SMIM7-203ENST00000461364 BAZ1BQ9UIG0 1483 aaKnown RBP13.62□□□□□ -0.23
SMIM7-203ENST00000461364 WIZO95785 1651 aa13.6□□□□□ -0.23
SMIM7-203ENST00000461364 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
SMIM7-203ENST00000461364 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
SMIM7-203ENST00000461364 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
SMIM7-203ENST00000461364 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
SMIM7-203ENST00000461364 NESP48681 1621 aa13.33□□□□□ -0.28
SMIM7-203ENST00000461364 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
SMIM7-203ENST00000461364 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
SMIM7-203ENST00000461364 CFTRP13569 1480 aa13.29□□□□□ -0.28
SMIM7-203ENST00000461364 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
SMIM7-203ENST00000461364 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
SMIM7-203ENST00000461364 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.29
SMIM7-203ENST00000461364 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
SMIM7-203ENST00000461364 CUX2O14529 1486 aa13.24□□□□□ -0.29
SMIM7-203ENST00000461364 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
SMIM7-203ENST00000461364 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
SMIM7-203ENST00000461364 WDR62O43379 1518 aa13.16□□□□□ -0.3
SMIM7-203ENST00000461364 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
SMIM7-203ENST00000461364 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
SMIM7-203ENST00000461364 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
SMIM7-203ENST00000461364 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
SMIM7-203ENST00000461364 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
SMIM7-203ENST00000461364 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
SMIM7-203ENST00000461364 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
SMIM7-203ENST00000461364 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
SMIM7-203ENST00000461364 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
SMIM7-203ENST00000461364 CUX1P39880 1505 aa12.88□□□□□ -0.35
SMIM7-203ENST00000461364 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
SMIM7-203ENST00000461364 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
SMIM7-203ENST00000461364 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
SMIM7-203ENST00000461364 EIF4G3O43432 1585 aaKnown RBP12.82□□□□□ -0.36
SMIM7-203ENST00000461364 FGD5Q6ZNL6 1462 aa12.82□□□□□ -0.36
SMIM7-203ENST00000461364 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
SMIM7-203ENST00000461364 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
SMIM7-203ENST00000461364 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
SMIM7-203ENST00000461364 SOGA1O94964 1423 aa12.76□□□□□ -0.37
SMIM7-203ENST00000461364 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
SMIM7-203ENST00000461364 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
SMIM7-203ENST00000461364 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
SMIM7-203ENST00000461364 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
SMIM7-203ENST00000461364 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
SMIM7-203ENST00000461364 CHD1O14646 1710 aa12.69□□□□□ -0.38
SMIM7-203ENST00000461364 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMIM7-203ENST00000461364 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
SMIM7-203ENST00000461364 GRIN2BQ13224 1484 aa12.66□□□□□ -0.38
SMIM7-203ENST00000461364 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
SMIM7-203ENST00000461364 TDRD9Q8NDG6 1382 aaKnown RBP12.63□□□□□ -0.39
SMIM7-203ENST00000461364 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
SMIM7-203ENST00000461364 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
SMIM7-203ENST00000461364 ADAMTS12P58397 1594 aa12.59□□□□□ -0.39
SMIM7-203ENST00000461364 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
SMIM7-203ENST00000461364 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
SMIM7-203ENST00000461364 CUL7Q14999 1698 aa12.55□□□□□ -0.4
SMIM7-203ENST00000461364 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
SMIM7-203ENST00000461364 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
SMIM7-203ENST00000461364 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
SMIM7-203ENST00000461364 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
SMIM7-203ENST00000461364 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
SMIM7-203ENST00000461364 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
SMIM7-203ENST00000461364 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
SMIM7-203ENST00000461364 NUP160Q12769 1436 aa12.46□□□□□ -0.41
SMIM7-203ENST00000461364 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
SMIM7-203ENST00000461364 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
SMIM7-203ENST00000461364 CEP170Q5SW79 1584 aa12.45□□□□□ -0.42
SMIM7-203ENST00000461364 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
SMIM7-203ENST00000461364 IGF1RP08069 1367 aa12.43□□□□□ -0.42
SMIM7-203ENST00000461364 FBLN2P98095 1184 aa12.42□□□□□ -0.42
SMIM7-203ENST00000461364 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
SMIM7-203ENST00000461364 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
SMIM7-203ENST00000461364 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
SMIM7-203ENST00000461364 EEA1Q15075 1411 aa12.35□□□□□ -0.43
SMIM7-203ENST00000461364 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
SMIM7-203ENST00000461364 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms