RNA–Protein interactions for RNA: ENST00000461106.6

PRKCZ-204, Transcript of protein kinase C zeta, humanhuman

TSL 2

Gene PRKCZ, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-204ENST00000461106 PTBP1P26599 531 aaKnown RBP eCLIP14.49□□□□□ -0.099e-15■■■□□ 19.1
PRKCZ-204ENST00000461106 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.541e-13■■■□□ 18.6
PRKCZ-204ENST00000461106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.74■□□□□ 0.752e-11■■■■■ 27.2
PRKCZ-204ENST00000461106 SF3B1O75533 1304 aaKnown RBP eCLIP17.88■□□□□ 0.453e-9■■■■■ 206.8
PRKCZ-204ENST00000461106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.26■□□□□ 0.515e-8■■■■■ 188.3
PRKCZ-204ENST00000461106 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.798e-8■■■■■ 27.9
PRKCZ-204ENST00000461106 SF3A3Q12874 501 aaKnown RBP eCLIP16.57■□□□□ 0.248e-8■■■□□ 17.9
PRKCZ-204ENST00000461106 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.549e-8■■■□□ 15
PRKCZ-204ENST00000461106 UPF1Q92900 1129 aaKnown RBP eCLIP20.63■□□□□ 0.891e-7■■■□□ 14.7
PRKCZ-204ENST00000461106 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■■■□□ 14.9
PRKCZ-204ENST00000461106 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.32□□□□□ -0.121e-7■■■■■ 51.6
PRKCZ-204ENST00000461106 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.291e-7■■■■■ 62.3
PRKCZ-204ENST00000461106 HNRNPKP61978 463 aaKnown RBP eCLIP16.35■□□□□ 0.211e-7■■■■□ 22.9
PRKCZ-204ENST00000461106 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■■■■■ 43.3
PRKCZ-204ENST00000461106 PCBP2Q15366 365 aaKnown RBP eCLIP16.53■□□□□ 0.245e-7■■■■■ 47
PRKCZ-204ENST00000461106 GTF2F1P35269 517 aaKnown RBP eCLIP17.7■□□□□ 0.425e-7■■■□□ 15.3
PRKCZ-204ENST00000461106 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.975e-7■■■■□ 23.1
PRKCZ-204ENST00000461106 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.27■□□□□ 0.036e-7■■■□□ 17.2
PRKCZ-204ENST00000461106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.57■□□□□ 0.47e-7■■■■■ 31.3
PRKCZ-204ENST00000461106 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■■■■■ 27.8
PRKCZ-204ENST00000461106 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.647e-7■■■■■ 34
PRKCZ-204ENST00000461106 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.91■□□□□ 0.147e-7■■■■■ 34.5
PRKCZ-204ENST00000461106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■■■■ 64.4
PRKCZ-204ENST00000461106 CSTF2P33240 577 aaKnown RBP eCLIP15.92■□□□□ 0.148e-7■■■■□ 19.5
PRKCZ-204ENST00000461106 HNRNPLP14866 589 aaKnown RBP eCLIP16.96■□□□□ 0.31e-6■■□□□ 11.7
PRKCZ-204ENST00000461106 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■□□□ 13.6
PRKCZ-204ENST00000461106 EFTUD2Q15029 972 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■■■■ 28.2
PRKCZ-204ENST00000461106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■■■□ 20
PRKCZ-204ENST00000461106 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■■□□ 18.4
PRKCZ-204ENST00000461106 BCCIPQ9P287 314 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■■■■ 35.1
PRKCZ-204ENST00000461106 RBM22Q9NW64 420 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 34.8
PRKCZ-204ENST00000461106 SF3B4Q15427 424 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■■■■□ 19.7
PRKCZ-204ENST00000461106 TROVE2P10155 538 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■■■ 28.8
PRKCZ-204ENST00000461106 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.84■□□□□ 0.453e-6■■□□□ 11.7
PRKCZ-204ENST00000461106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■□□□ 13.3
PRKCZ-204ENST00000461106 ILF3Q12906 894 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■□□ 16
PRKCZ-204ENST00000461106 NCBP2P52298 156 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■■■■□ 21.7
PRKCZ-204ENST00000461106 NKRFO15226 690 aaKnown RBP eCLIP18.75■□□□□ 0.593e-6■■□□□ 12.3
PRKCZ-204ENST00000461106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.654e-6■■■■□ 26
PRKCZ-204ENST00000461106 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.45■□□□□ 0.544e-6■■■■□ 26.5
PRKCZ-204ENST00000461106 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.294e-6■■■□□ 17.8
PRKCZ-204ENST00000461106 EIF4G2P78344 907 aaKnown RBP eCLIP23.94■■□□□ 1.424e-6■■□□□ 14
PRKCZ-204ENST00000461106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.15■□□□□ 0.54e-6■■■■□ 21
PRKCZ-204ENST00000461106 DDX6P26196 483 aaKnown RBP eCLIP17.41■□□□□ 0.385e-6■■■■■ 46.6
Retrieved 44 of 44 RNA–protein pairs in 11.8 ms