RNA–Protein interactions for RNA: ENST00000460933.5

RYK-201, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RYK, Length 2,667 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-201ENST00000460933 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
RYK-201ENST00000460933 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
RYK-201ENST00000460933 ABCC9O60706 1549 aa15.39■□□□□ 0.05
RYK-201ENST00000460933 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
RYK-201ENST00000460933 NACADO15069 1562 aa14.83□□□□□ -0.04
RYK-201ENST00000460933 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
RYK-201ENST00000460933 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
RYK-201ENST00000460933 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
RYK-201ENST00000460933 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
RYK-201ENST00000460933 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
RYK-201ENST00000460933 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
RYK-201ENST00000460933 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
RYK-201ENST00000460933 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
RYK-201ENST00000460933 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
RYK-201ENST00000460933 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
RYK-201ENST00000460933 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
RYK-201ENST00000460933 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
RYK-201ENST00000460933 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
RYK-201ENST00000460933 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
RYK-201ENST00000460933 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
RYK-201ENST00000460933 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
RYK-201ENST00000460933 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
RYK-201ENST00000460933 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
RYK-201ENST00000460933 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
RYK-201ENST00000460933 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
RYK-201ENST00000460933 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
RYK-201ENST00000460933 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
RYK-201ENST00000460933 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
RYK-201ENST00000460933 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
RYK-201ENST00000460933 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
RYK-201ENST00000460933 WIZO95785 1651 aa13.47□□□□□ -0.25
RYK-201ENST00000460933 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
RYK-201ENST00000460933 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
RYK-201ENST00000460933 NESP48681 1621 aa13.32□□□□□ -0.28
RYK-201ENST00000460933 THOC2Q8NI27 1593 aaKnown RBP13.26□□□□□ -0.29
RYK-201ENST00000460933 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
RYK-201ENST00000460933 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
RYK-201ENST00000460933 CUX2O14529 1486 aa13.23□□□□□ -0.29
RYK-201ENST00000460933 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
RYK-201ENST00000460933 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
RYK-201ENST00000460933 CFTRP13569 1480 aa13.16□□□□□ -0.3
RYK-201ENST00000460933 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
RYK-201ENST00000460933 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
RYK-201ENST00000460933 WDR62O43379 1518 aa13.11□□□□□ -0.31
RYK-201ENST00000460933 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
RYK-201ENST00000460933 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
RYK-201ENST00000460933 TRIM41Q8WV44 630 aa13.08□□□□□ -0.31
RYK-201ENST00000460933 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
RYK-201ENST00000460933 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
RYK-201ENST00000460933 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
RYK-201ENST00000460933 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
RYK-201ENST00000460933 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.35
RYK-201ENST00000460933 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
RYK-201ENST00000460933 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
RYK-201ENST00000460933 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
RYK-201ENST00000460933 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
RYK-201ENST00000460933 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
RYK-201ENST00000460933 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
RYK-201ENST00000460933 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
RYK-201ENST00000460933 CUX1P39880 1505 aa12.78□□□□□ -0.36
RYK-201ENST00000460933 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.37
RYK-201ENST00000460933 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
RYK-201ENST00000460933 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
RYK-201ENST00000460933 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
RYK-201ENST00000460933 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
RYK-201ENST00000460933 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.37
RYK-201ENST00000460933 SOGA1O94964 1423 aa12.7□□□□□ -0.38
RYK-201ENST00000460933 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
RYK-201ENST00000460933 RAD54L2Q9Y4B4 1467 aa12.67□□□□□ -0.38
RYK-201ENST00000460933 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
RYK-201ENST00000460933 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
RYK-201ENST00000460933 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
RYK-201ENST00000460933 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
RYK-201ENST00000460933 CHD1O14646 1710 aa12.63□□□□□ -0.39
RYK-201ENST00000460933 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
RYK-201ENST00000460933 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
RYK-201ENST00000460933 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
RYK-201ENST00000460933 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
RYK-201ENST00000460933 HRCP23327 699 aa12.58□□□□□ -0.4
RYK-201ENST00000460933 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
RYK-201ENST00000460933 EEA1Q15075 1411 aa12.56□□□□□ -0.4
RYK-201ENST00000460933 SNAPC4Q5SXM2 1469 aa12.55□□□□□ -0.4
RYK-201ENST00000460933 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
RYK-201ENST00000460933 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
RYK-201ENST00000460933 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
RYK-201ENST00000460933 PPARGC1BQ86YN6 1023 aaKnown RBP12.54□□□□□ -0.4
RYK-201ENST00000460933 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
RYK-201ENST00000460933 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
RYK-201ENST00000460933 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
RYK-201ENST00000460933 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
RYK-201ENST00000460933 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
RYK-201ENST00000460933 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
RYK-201ENST00000460933 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
RYK-201ENST00000460933 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
RYK-201ENST00000460933 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
RYK-201ENST00000460933 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
RYK-201ENST00000460933 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
RYK-201ENST00000460933 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
RYK-201ENST00000460933 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
RYK-201ENST00000460933 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms