RNA–Protein interactions for RNA: ENST00000460612.5

ECHDC2-204, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 2,645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-204ENST00000460612 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
ECHDC2-204ENST00000460612 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
ECHDC2-204ENST00000460612 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
ECHDC2-204ENST00000460612 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
ECHDC2-204ENST00000460612 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
ECHDC2-204ENST00000460612 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
ECHDC2-204ENST00000460612 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
ECHDC2-204ENST00000460612 HRCP23327 699 aa28.44■■■□□ 2.14
ECHDC2-204ENST00000460612 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
ECHDC2-204ENST00000460612 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
ECHDC2-204ENST00000460612 PCGF6Q9BYE7 350 aa28.03■■■□□ 2.08
ECHDC2-204ENST00000460612 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
ECHDC2-204ENST00000460612 ABCC9O60706 1549 aa27.98■■■□□ 2.07
ECHDC2-204ENST00000460612 NACADO15069 1562 aa27.83■■■□□ 2.05
ECHDC2-204ENST00000460612 PPARGC1BQ86YN6 1023 aaKnown RBP27.73■■■□□ 2.03
ECHDC2-204ENST00000460612 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
ECHDC2-204ENST00000460612 LOC105371045A0A1W2PR82 267 aa27.42■■□□□ 1.98
ECHDC2-204ENST00000460612 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
ECHDC2-204ENST00000460612 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
ECHDC2-204ENST00000460612 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
ECHDC2-204ENST00000460612 MROH2BQ7Z745 1585 aa27.24■■□□□ 1.95
ECHDC2-204ENST00000460612 WIZO95785 1651 aa27.1■■□□□ 1.93
ECHDC2-204ENST00000460612 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
ECHDC2-204ENST00000460612 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
ECHDC2-204ENST00000460612 UNC13AQ9UPW8 1703 aa27.01■■□□□ 1.91
ECHDC2-204ENST00000460612 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
ECHDC2-204ENST00000460612 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
ECHDC2-204ENST00000460612 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
ECHDC2-204ENST00000460612 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
ECHDC2-204ENST00000460612 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
ECHDC2-204ENST00000460612 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
ECHDC2-204ENST00000460612 FAM9AQ8IZU1 332 aaPredicted RBP26.64■■□□□ 1.86
ECHDC2-204ENST00000460612 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
ECHDC2-204ENST00000460612 SMARCA2P51531 1590 aa26.56■■□□□ 1.84
ECHDC2-204ENST00000460612 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
ECHDC2-204ENST00000460612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.847e-7■□□□□ 10.8
ECHDC2-204ENST00000460612 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
ECHDC2-204ENST00000460612 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
ECHDC2-204ENST00000460612 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
ECHDC2-204ENST00000460612 ACIN1Q9UKV3 1341 aaKnown RBP26.16■■□□□ 1.78
ECHDC2-204ENST00000460612 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
ECHDC2-204ENST00000460612 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
ECHDC2-204ENST00000460612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.11■■□□□ 1.77
ECHDC2-204ENST00000460612 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
ECHDC2-204ENST00000460612 SOGA1O94964 1423 aa26.05■■□□□ 1.76
ECHDC2-204ENST00000460612 NEUROD1Q13562 356 aa26.05■■□□□ 1.76
ECHDC2-204ENST00000460612 EEA1Q15075 1411 aa26■■□□□ 1.75
ECHDC2-204ENST00000460612 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
ECHDC2-204ENST00000460612 CENPBP07199 599 aaPredicted RBP25.96■■□□□ 1.75
ECHDC2-204ENST00000460612 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
ECHDC2-204ENST00000460612 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
ECHDC2-204ENST00000460612 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.73
ECHDC2-204ENST00000460612 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
ECHDC2-204ENST00000460612 GTF3C3Q9Y5Q9 886 aa25.88■■□□□ 1.73
ECHDC2-204ENST00000460612 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
ECHDC2-204ENST00000460612 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
ECHDC2-204ENST00000460612 MYT1Q01538 1121 aa25.78■■□□□ 1.72
ECHDC2-204ENST00000460612 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
ECHDC2-204ENST00000460612 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
ECHDC2-204ENST00000460612 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.71
ECHDC2-204ENST00000460612 NCAPD3P42695 1498 aa25.7■■□□□ 1.71
ECHDC2-204ENST00000460612 KIF21BO75037 1637 aa25.68■■□□□ 1.7
ECHDC2-204ENST00000460612 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
ECHDC2-204ENST00000460612 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
ECHDC2-204ENST00000460612 TOP2BQ02880 1626 aa25.64■■□□□ 1.69
ECHDC2-204ENST00000460612 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
ECHDC2-204ENST00000460612 ZNF316A6NFI3 1004 aaPredicted RBP25.58■■□□□ 1.69
ECHDC2-204ENST00000460612 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.66
ECHDC2-204ENST00000460612 CLIP1P30622 1438 aa25.42■■□□□ 1.66
ECHDC2-204ENST00000460612 CFTRP13569 1480 aa25.42■■□□□ 1.66
ECHDC2-204ENST00000460612 CUX1P39880 1505 aa25.4■■□□□ 1.66
ECHDC2-204ENST00000460612 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
ECHDC2-204ENST00000460612 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
ECHDC2-204ENST00000460612 VPS8Q8N3P4 1428 aa25.31■■□□□ 1.64
ECHDC2-204ENST00000460612 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
ECHDC2-204ENST00000460612 MIER1Q8N108 512 aa25.29■■□□□ 1.64
ECHDC2-204ENST00000460612 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
ECHDC2-204ENST00000460612 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
ECHDC2-204ENST00000460612 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
ECHDC2-204ENST00000460612 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
ECHDC2-204ENST00000460612 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
ECHDC2-204ENST00000460612 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
ECHDC2-204ENST00000460612 APLP2Q06481 763 aa25.1■■□□□ 1.61
ECHDC2-204ENST00000460612 ARAP1Q96P48 1450 aa25.08■■□□□ 1.61
ECHDC2-204ENST00000460612 CUX2O14529 1486 aa25■■□□□ 1.59
ECHDC2-204ENST00000460612 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
ECHDC2-204ENST00000460612 IGF1RP08069 1367 aa24.93■■□□□ 1.58
ECHDC2-204ENST00000460612 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
ECHDC2-204ENST00000460612 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
ECHDC2-204ENST00000460612 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.57
ECHDC2-204ENST00000460612 DNMBPQ6XZF7 1577 aa24.82■■□□□ 1.56
ECHDC2-204ENST00000460612 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
ECHDC2-204ENST00000460612 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
ECHDC2-204ENST00000460612 NESP48681 1621 aa24.77■■□□□ 1.56
ECHDC2-204ENST00000460612 SUPT16HQ9Y5B9 1047 aaKnown RBP24.76■■□□□ 1.55
ECHDC2-204ENST00000460612 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
ECHDC2-204ENST00000460612 DHX57Q6P158 1386 aaKnown RBP24.72■■□□□ 1.55
ECHDC2-204ENST00000460612 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
ECHDC2-204ENST00000460612 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
ECHDC2-204ENST00000460612 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms