RNA–Protein interactions for RNA: ENST00000459985.1

AL355987.4-202, humanhuman

TSL 2

Gene AL355987.4, Length 1,900 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355987.4-202ENST00000459985 CSTF2P33240 577 aaKnown RBP eCLIP21.53■■□□□ 1.043e-27■■■■■ 72.5
AL355987.4-202ENST00000459985 SF3B1O75533 1304 aaKnown RBP eCLIP24.02■■□□□ 1.449e-9■■■■■ 62.4
AL355987.4-202ENST00000459985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.09■■□□□ 1.618e-9■■■■■ 54.8
AL355987.4-202ENST00000459985 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.35■■□□□ 1.494e-6■■■■■ 33.1
AL355987.4-202ENST00000459985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.75■■□□□ 1.553e-9■■■■■ 27.2
AL355987.4-202ENST00000459985 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.351e-8■■■■□ 26.6
AL355987.4-202ENST00000459985 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.6■■■□□ 2.016e-6■■■■□ 24.4
AL355987.4-202ENST00000459985 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.69■■□□□ 1.385e-7■■■■□ 22.9
AL355987.4-202ENST00000459985 TROVE2P10155 538 aaKnown RBP eCLIP23.65■■□□□ 1.384e-7■■■■□ 22.1
AL355987.4-202ENST00000459985 SF3B4Q15427 424 aaKnown RBP eCLIP20.39■□□□□ 0.855e-7■■■■□ 22.1
AL355987.4-202ENST00000459985 NONOQ15233 471 aaKnown RBP eCLIP26.36■■□□□ 1.811e-11■■■■□ 21.9
AL355987.4-202ENST00000459985 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.8■■□□□ 1.563e-7■■■■□ 21.4
AL355987.4-202ENST00000459985 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.86■□□□□ 0.932e-6■■■■□ 21.1
AL355987.4-202ENST00000459985 SF3A3Q12874 501 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■■■□ 20.5
AL355987.4-202ENST00000459985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.12■□□□□ 0.492e-7■■■■□ 19.4
AL355987.4-202ENST00000459985 FMR1Q06787 632 aaKnown RBP eCLIP26.36■■□□□ 1.813e-8■■■□□ 18.7
AL355987.4-202ENST00000459985 PPIGQ13427 754 aaKnown RBP eCLIP23.69■■□□□ 1.387e-10■■■□□ 18.3
AL355987.4-202ENST00000459985 DDX3XO00571 662 aaKnown RBP eCLIP25.24■■□□□ 1.635e-12■■■□□ 18.3
AL355987.4-202ENST00000459985 LSM11P83369 360 aaKnown RBP eCLIP21.69■■□□□ 1.064e-11■■■□□ 17.4
AL355987.4-202ENST00000459985 PUM1Q14671 1186 aaKnown RBP eCLIP21.95■■□□□ 1.14e-10■■■□□ 17.1
AL355987.4-202ENST00000459985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.83■■■■□ 3.011e-7■■■□□ 16.6
AL355987.4-202ENST00000459985 NIPBLQ6KC79 2804 aaeCLIP16.87■□□□□ 0.296e-7■■■□□ 16
AL355987.4-202ENST00000459985 NCBP2P52298 156 aaKnown RBP eCLIP21.98■■□□□ 1.116e-7■■■□□ 14.9
AL355987.4-202ENST00000459985 GTF2F1P35269 517 aaKnown RBP eCLIP26.06■■□□□ 1.762e-7■■■□□ 14.8
AL355987.4-202ENST00000459985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.72■■■□□ 2.835e-8■■■□□ 14.6
AL355987.4-202ENST00000459985 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.97■■□□□ 1.592e-11■■□□□ 13.8
AL355987.4-202ENST00000459985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.42■■□□□ 1.662e-6■■□□□ 13.8
AL355987.4-202ENST00000459985 FXR2P51116 673 aaKnown RBP eCLIP26.18■■□□□ 1.782e-8■■□□□ 13.5
AL355987.4-202ENST00000459985 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.65■■□□□ 1.72e-6■■□□□ 13.3
AL355987.4-202ENST00000459985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.2■■■□□ 2.274e-15■■□□□ 13
AL355987.4-202ENST00000459985 SRSF9Q13242 221 aaKnown RBP eCLIP16.38■□□□□ 0.212e-13■■□□□ 13
AL355987.4-202ENST00000459985 PABPN1Q86U42 306 aaKnown RBP eCLIP40.08■■■■■ 4.013e-7■■□□□ 12.5
AL355987.4-202ENST00000459985 PCBP1Q15365 356 aaKnown RBP eCLIP24.61■■□□□ 1.531e-7■■□□□ 12.1
AL355987.4-202ENST00000459985 SRSF1Q07955 248 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■□□□ 11.9
AL355987.4-202ENST00000459985 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.94■■□□□ 1.748e-8■■□□□ 11.8
AL355987.4-202ENST00000459985 RBM15Q96T37 977 aaKnown RBP eCLIP24.29■■□□□ 1.487e-9■■□□□ 11.5
AL355987.4-202ENST00000459985 AATFQ9NY61 560 aaKnown RBP eCLIP27.05■■□□□ 1.922e-6■■□□□ 11.4
AL355987.4-202ENST00000459985 RBM5P52756 815 aaKnown RBP eCLIP26.55■■□□□ 1.845e-10■■□□□ 11.4
AL355987.4-202ENST00000459985 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.28■■□□□ 1.329e-9■□□□□ 11.3
AL355987.4-202ENST00000459985 FTOQ9C0B1 505 aaKnown RBP eCLIP27.11■■□□□ 1.932e-6■□□□□ 11.3
AL355987.4-202ENST00000459985 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.14■□□□□ 0.974e-11■□□□□ 11.1
AL355987.4-202ENST00000459985 RPS3P23396 243 aaKnown RBP eCLIP23.02■■□□□ 1.287e-7■□□□□ 11
AL355987.4-202ENST00000459985 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.05■■□□□ 1.283e-17■□□□□ 10.7
AL355987.4-202ENST00000459985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.55■■■■□ 3.123e-9■□□□□ 10.7
AL355987.4-202ENST00000459985 NKRFO15226 690 aaKnown RBP eCLIP25.82■■□□□ 1.722e-8■□□□□ 10.4
AL355987.4-202ENST00000459985 HLTFQ14527 1009 aaKnown RBP eCLIP24.74■■□□□ 1.558e-8■□□□□ 10.3
AL355987.4-202ENST00000459985 EIF3HO15372 352 aaKnown RBP eCLIP24.39■■□□□ 1.53e-13■□□□□ 10.2
AL355987.4-202ENST00000459985 YBX3P16989 372 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■□□□□ 10.1
AL355987.4-202ENST00000459985 EFTUD2Q15029 972 aaKnown RBP eCLIP24.04■■□□□ 1.441e-20■□□□□ 9.7
AL355987.4-202ENST00000459985 RBFOX2O43251 390 aaKnown RBP eCLIP19.15■□□□□ 0.661e-10■□□□□ 9.7
AL355987.4-202ENST00000459985 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.19■■□□□ 1.148e-6■□□□□ 9.7
AL355987.4-202ENST00000459985 PRPF4O43172 522 aaKnown RBP eCLIP24■■□□□ 1.431e-8■□□□□ 9.6
AL355987.4-202ENST00000459985 AARSP49588 968 aaKnown RBP eCLIP24.89■■□□□ 1.582e-7■□□□□ 9.5
AL355987.4-202ENST00000459985 UPF1Q92900 1129 aaKnown RBP eCLIP26.83■■□□□ 1.899e-8■□□□□ 9.3
AL355987.4-202ENST00000459985 DDX42Q86XP3 938 aaKnown RBP eCLIP24.76■■□□□ 1.556e-6■□□□□ 9.2
AL355987.4-202ENST00000459985 RBM22Q9NW64 420 aaKnown RBP eCLIP23.65■■□□□ 1.388e-9■□□□□ 9.1
AL355987.4-202ENST00000459985 ZC3H11AO75152 810 aaKnown RBP eCLIP25.04■■□□□ 1.61e-7■□□□□ 9
AL355987.4-202ENST00000459985 WDR43Q15061 677 aaKnown RBP eCLIP30.99■■■□□ 2.558e-8■□□□□ 8.2
Retrieved 58 of 58 RNA–protein pairs in 12.7 ms