RNA–Protein interactions for RNA: ENST00000459787.1

GYPC-204, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 3

Gene GYPC, Length 758 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-204ENST00000459787 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
GYPC-204ENST00000459787 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
GYPC-204ENST00000459787 ABCC9O60706 1549 aa30.62■■■□□ 2.49
GYPC-204ENST00000459787 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
GYPC-204ENST00000459787 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
GYPC-204ENST00000459787 NACADO15069 1562 aa29.32■■■□□ 2.28
GYPC-204ENST00000459787 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
GYPC-204ENST00000459787 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
GYPC-204ENST00000459787 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
GYPC-204ENST00000459787 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
GYPC-204ENST00000459787 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
GYPC-204ENST00000459787 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
GYPC-204ENST00000459787 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
GYPC-204ENST00000459787 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
GYPC-204ENST00000459787 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
GYPC-204ENST00000459787 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
GYPC-204ENST00000459787 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
GYPC-204ENST00000459787 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
GYPC-204ENST00000459787 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
GYPC-204ENST00000459787 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
GYPC-204ENST00000459787 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
GYPC-204ENST00000459787 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
GYPC-204ENST00000459787 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
GYPC-204ENST00000459787 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
GYPC-204ENST00000459787 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
GYPC-204ENST00000459787 PEG3Q9GZU2 1588 aa26.85■■□□□ 1.89
GYPC-204ENST00000459787 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
GYPC-204ENST00000459787 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
GYPC-204ENST00000459787 WIZO95785 1651 aa26.5■■□□□ 1.83
GYPC-204ENST00000459787 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
GYPC-204ENST00000459787 NESP48681 1621 aa26.42■■□□□ 1.82
GYPC-204ENST00000459787 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
GYPC-204ENST00000459787 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
GYPC-204ENST00000459787 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
GYPC-204ENST00000459787 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
GYPC-204ENST00000459787 CUX2O14529 1486 aa26.23■■□□□ 1.79
GYPC-204ENST00000459787 CFTRP13569 1480 aa26.11■■□□□ 1.77
GYPC-204ENST00000459787 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
GYPC-204ENST00000459787 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
GYPC-204ENST00000459787 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
GYPC-204ENST00000459787 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
GYPC-204ENST00000459787 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
GYPC-204ENST00000459787 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
GYPC-204ENST00000459787 WDR62O43379 1518 aa25.83■■□□□ 1.73
GYPC-204ENST00000459787 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
GYPC-204ENST00000459787 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
GYPC-204ENST00000459787 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
GYPC-204ENST00000459787 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
GYPC-204ENST00000459787 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
GYPC-204ENST00000459787 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
GYPC-204ENST00000459787 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
GYPC-204ENST00000459787 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
GYPC-204ENST00000459787 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
GYPC-204ENST00000459787 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
GYPC-204ENST00000459787 SOGA1O94964 1423 aa25.24■■□□□ 1.63
GYPC-204ENST00000459787 CUX1P39880 1505 aa25.23■■□□□ 1.63
GYPC-204ENST00000459787 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
GYPC-204ENST00000459787 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
GYPC-204ENST00000459787 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
GYPC-204ENST00000459787 RAD54L2Q9Y4B4 1467 aa25.17■■□□□ 1.62
GYPC-204ENST00000459787 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.623e-7■■■□□ 15.4
GYPC-204ENST00000459787 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
GYPC-204ENST00000459787 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
GYPC-204ENST00000459787 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
GYPC-204ENST00000459787 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
GYPC-204ENST00000459787 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
GYPC-204ENST00000459787 FBLN2P98095 1184 aa24.96■■□□□ 1.59
GYPC-204ENST00000459787 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
GYPC-204ENST00000459787 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
GYPC-204ENST00000459787 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
GYPC-204ENST00000459787 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
GYPC-204ENST00000459787 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
GYPC-204ENST00000459787 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
GYPC-204ENST00000459787 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
GYPC-204ENST00000459787 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.57
GYPC-204ENST00000459787 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
GYPC-204ENST00000459787 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
GYPC-204ENST00000459787 CHD1O14646 1710 aa24.75■■□□□ 1.55
GYPC-204ENST00000459787 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
GYPC-204ENST00000459787 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
GYPC-204ENST00000459787 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
GYPC-204ENST00000459787 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
GYPC-204ENST00000459787 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
GYPC-204ENST00000459787 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
GYPC-204ENST00000459787 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
GYPC-204ENST00000459787 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
GYPC-204ENST00000459787 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
GYPC-204ENST00000459787 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
GYPC-204ENST00000459787 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
GYPC-204ENST00000459787 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
GYPC-204ENST00000459787 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
GYPC-204ENST00000459787 IGF1RP08069 1367 aa24.54■■□□□ 1.52
GYPC-204ENST00000459787 NUP160Q12769 1436 aa24.52■■□□□ 1.52
GYPC-204ENST00000459787 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
GYPC-204ENST00000459787 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
GYPC-204ENST00000459787 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
GYPC-204ENST00000459787 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
GYPC-204ENST00000459787 CUL7Q14999 1698 aa24.32■■□□□ 1.48
GYPC-204ENST00000459787 KIAA0586Q9BVV6 1533 aa24.26■■□□□ 1.47
GYPC-204ENST00000459787 PRG4Q92954 1404 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms