RNA–Protein interactions for RNA: ENST00000459332.1
Retrieved 8 of 8 RNA–protein pairs in 7.3 ms
SNORD108-201, Transcript of small nucleolar RNA, C/D box 108, human
BASIC
Gene SNORD108, Length 71 nt, Biotype snoRNA.
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
SNORD108-201 | ENST00000459332 | EXOSC5 | Q9NQT4 | 235 aa | Known RBP eCLIP | 4.24 | □□□□□ -1.73 | 6e-28 | ■■■■■ 162.5 |
SNORD108-201 | ENST00000459332 | BCCIP | Q9P287 | 314 aa | Known RBP eCLIP | 5.88 | □□□□□ -1.47 | 4e-20 | ■■■■■ 35.5 |
SNORD108-201 | ENST00000459332 | RBFOX2 | O43251 | 390 aa | Known RBP eCLIP | 2.99 | □□□□□ -1.93 | 3e-11 | ■■□□□ 11.8 |
SNORD108-201 | ENST00000459332 | DDX6 | P26196 | 483 aa | Known RBP eCLIP | 3.86 | □□□□□ -1.79 | 2e-9 | ■■■□□ 15.6 |
SNORD108-201 | ENST00000459332 | SRSF7 | Q16629 | 238 aa | Known RBP eCLIP | 3.14 | □□□□□ -1.91 | 8e-8 | ■□□□□ 8.4 |
SNORD108-201 | ENST00000459332 | FUBP3 | Q96I24 | 572 aa | Known RBP eCLIP | 4.74 | □□□□□ -1.65 | 2e-7 | ■□□□□ 9.9 |
SNORD108-201 | ENST00000459332 | HNRNPM | P52272 | 730 aa | Known RBP eCLIP | 3.68 | □□□□□ -1.82 | 3e-7 | ■■■■□ 23.2 |
SNORD108-201 | ENST00000459332 | DGCR8 | Q8WYQ5 | 773 aa | Known RBP eCLIP | 4.27 | □□□□□ -1.73 | 4e-7 | ■■■■□ 24.1 |