RNA–Protein interactions for RNA: ENST00000459255.1

SCARNA10-201, small Cajal body-specific RNA 10, humanhuman

BASIC

Gene SCARNA10, Length 330 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA10-201ENST00000459255 DKC1O60832 514 aaKnown RBP eCLIP5.18□□□□□ -1.581e-323■■■■■ 203.1
SCARNA10-201ENST00000459255 NOLC1Q14978 699 aaKnown RBP eCLIP5.17□□□□□ -1.581e-259■■■■■ 172.5
SCARNA10-201ENST00000459255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.67□□□□□ -1.663e-34■■■■■ 85.1
SCARNA10-201ENST00000459255 SMNDC1O75940 238 aaKnown RBP eCLIP4.88□□□□□ -1.639e-64■■■■■ 82.8
SCARNA10-201ENST00000459255 NIPBLQ6KC79 2804 aaeCLIP4.07□□□□□ -1.764e-37■■■■■ 51.6
SCARNA10-201ENST00000459255 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.731e-68■■■■■ 51.4
SCARNA10-201ENST00000459255 SF3A3Q12874 501 aaKnown RBP eCLIP4.35□□□□□ -1.713e-69■■■■■ 39.2
SCARNA10-201ENST00000459255 SF3B4Q15427 424 aaKnown RBP eCLIP4.51□□□□□ -1.691e-323■■■■□ 26
SCARNA10-201ENST00000459255 NIP7Q9Y221 180 aaKnown RBP eCLIP5.83□□□□□ -1.482e-14■■■■□ 21
SCARNA10-201ENST00000459255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.08□□□□□ -1.68e-55■■■■□ 20.4
SCARNA10-201ENST00000459255 AATFQ9NY61 560 aaKnown RBP eCLIP5.55□□□□□ -1.521e-323■■■■□ 19.5
SCARNA10-201ENST00000459255 WDR43Q15061 677 aaKnown RBP eCLIP6.16□□□□□ -1.424e-33■■■□□ 18.2
SCARNA10-201ENST00000459255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.87□□□□□ -1.634e-83■■■□□ 17.6
SCARNA10-201ENST00000459255 SSBP05455 408 aaKnown RBP eCLIP5.12□□□□□ -1.599e-10■■■□□ 17.5
SCARNA10-201ENST00000459255 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.84□□□□□ -1.636e-30■■■□□ 16.2
SCARNA10-201ENST00000459255 BCCIPQ9P287 314 aaKnown RBP eCLIP5.91□□□□□ -1.461e-323■■■□□ 16
SCARNA10-201ENST00000459255 RBM22Q9NW64 420 aaKnown RBP eCLIP4.7□□□□□ -1.664e-42■■■□□ 15.5
SCARNA10-201ENST00000459255 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.61□□□□□ -1.672e-6■■■□□ 15.1
SCARNA10-201ENST00000459255 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.81□□□□□ -1.643e-29■■□□□ 13.6
SCARNA10-201ENST00000459255 SF3B1O75533 1304 aaKnown RBP eCLIP4.94□□□□□ -1.623e-7■■□□□ 13.4
SCARNA10-201ENST00000459255 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.06□□□□□ -1.69e-40■■□□□ 13.1
SCARNA10-201ENST00000459255 AGGF1Q8N302 714 aaeCLIP4.64□□□□□ -1.673e-51■■□□□ 13.1
SCARNA10-201ENST00000459255 LSM11P83369 360 aaKnown RBP eCLIP4.16□□□□□ -1.745e-53■■□□□ 12.9
SCARNA10-201ENST00000459255 AARSP49588 968 aaKnown RBP eCLIP4.98□□□□□ -1.613e-56■■□□□ 12.7
SCARNA10-201ENST00000459255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.09□□□□□ -1.276e-55■□□□□ 10.7
SCARNA10-201ENST00000459255 RBFOX2O43251 390 aaKnown RBP eCLIP3.82□□□□□ -1.86e-45■□□□□ 10.7
SCARNA10-201ENST00000459255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.27□□□□□ -1.573e-6■□□□□ 10.5
SCARNA10-201ENST00000459255 TROVE2P10155 538 aaKnown RBP eCLIP4.75□□□□□ -1.652e-51■□□□□ 10.4
SCARNA10-201ENST00000459255 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.89□□□□□ -1.633e-15■□□□□ 10.1
SCARNA10-201ENST00000459255 EIF4G2P78344 907 aaKnown RBP eCLIP6.53□□□□□ -1.361e-11■□□□□ 10
SCARNA10-201ENST00000459255 EIF3HO15372 352 aaKnown RBP eCLIP4.77□□□□□ -1.656e-44■□□□□ 9.7
SCARNA10-201ENST00000459255 UPF1Q92900 1129 aaKnown RBP eCLIP6.5□□□□□ -1.371e-32■□□□□ 9.5
SCARNA10-201ENST00000459255 DDX21Q9NR30 783 aaKnown RBP eCLIP5.94□□□□□ -1.461e-26■□□□□ 8.5
SCARNA10-201ENST00000459255 SLBPQ14493 270 aaKnown RBP eCLIP4.42□□□□□ -1.75e-10■□□□□ 8.4
Retrieved 34 of 34 RNA–protein pairs in 8.4 ms