RNA–Protein interactions for RNA: ENST00000459174.1

SNORD4A-201, Transcript of small nucleolar RNA, C/D box 4A, humanhuman

BASIC

Gene SNORD4A, Length 72 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD4A-201ENST00000459174 AATFQ9NY61 560 aaKnown RBP eCLIP-0.35□□□□□ -2.472e-60■■■■■ 42.4
SNORD4A-201ENST00000459174 SMNDC1O75940 238 aaKnown RBP eCLIP-0.1□□□□□ -2.431e-48■■■■■ 33
SNORD4A-201ENST00000459174 NOLC1Q14978 699 aaKnown RBP eCLIP-0.09□□□□□ -2.421e-323■■■■□ 26.2
SNORD4A-201ENST00000459174 SSBP05455 408 aaKnown RBP eCLIP-0.27□□□□□ -2.452e-10■■■■□ 20.3
SNORD4A-201ENST00000459174 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-0.18□□□□□ -2.445e-7■■■■□ 20.2
SNORD4A-201ENST00000459174 AQRO60306 1485 aaKnown RBP eCLIP-0.49□□□□□ -2.496e-13■■■□□ 16.2
SNORD4A-201ENST00000459174 SF3B4Q15427 424 aaKnown RBP eCLIP-0.05□□□□□ -2.425e-29■■■□□ 15.5
SNORD4A-201ENST00000459174 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.22□□□□□ -2.441e-9■■■□□ 15.4
SNORD4A-201ENST00000459174 DKC1O60832 514 aaKnown RBP eCLIP-0.41□□□□□ -2.481e-29■■□□□ 14.3
SNORD4A-201ENST00000459174 XRCC6P12956 609 aaKnown RBP eCLIP-0.19□□□□□ -2.447e-19■■□□□ 12.9
SNORD4A-201ENST00000459174 PTBP1P26599 531 aaKnown RBP eCLIP-0.28□□□□□ -2.456e-28■■□□□ 12.8
SNORD4A-201ENST00000459174 PHF6Q8IWS0 365 aaKnown RBP eCLIP-0.1□□□□□ -2.438e-21■■□□□ 12.6
SNORD4A-201ENST00000459174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP-0.18□□□□□ -2.447e-8■□□□□ 10.3
SNORD4A-201ENST00000459174 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.26□□□□□ -2.458e-40■□□□□ 10.2
SNORD4A-201ENST00000459174 ABCF1Q8NE71 845 aaKnown RBP eCLIP-0.27□□□□□ -2.459e-15■□□□□ 9.4
SNORD4A-201ENST00000459174 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.17□□□□□ -2.442e-14■□□□□ 9.2
SNORD4A-201ENST00000459174 DDX24Q9GZR7 859 aaKnown RBP eCLIP-0.28□□□□□ -2.453e-19■□□□□ 8.9
SNORD4A-201ENST00000459174 LARP7Q4G0J3 582 aaKnown RBP eCLIP-0.16□□□□□ -2.442e-10■□□□□ 8.2
Retrieved 18 of 18 RNA–protein pairs in 5.4 ms