RNA–Protein interactions for RNA: ENST00000458090.1

AC009963.3-201, humanhuman

BASIC

Gene AC009963.3, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.3-201ENST00000458090 NISCHQ9Y2I1 1504 aa15.36■□□□□ 0.05
AC009963.3-201ENST00000458090 CCDC180Q9P1Z9 1646 aa13.89□□□□□ -0.19
AC009963.3-201ENST00000458090 ABCC9O60706 1549 aa13.8□□□□□ -0.2
AC009963.3-201ENST00000458090 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
AC009963.3-201ENST00000458090 NACADO15069 1562 aa13.12□□□□□ -0.31
AC009963.3-201ENST00000458090 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
AC009963.3-201ENST00000458090 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
AC009963.3-201ENST00000458090 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
AC009963.3-201ENST00000458090 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
AC009963.3-201ENST00000458090 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
AC009963.3-201ENST00000458090 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
AC009963.3-201ENST00000458090 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
AC009963.3-201ENST00000458090 ZCCHC6Q5VYS8 1495 aaKnown RBP12.7□□□□□ -0.38
AC009963.3-201ENST00000458090 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
AC009963.3-201ENST00000458090 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
AC009963.3-201ENST00000458090 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
AC009963.3-201ENST00000458090 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
AC009963.3-201ENST00000458090 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
AC009963.3-201ENST00000458090 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
AC009963.3-201ENST00000458090 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
AC009963.3-201ENST00000458090 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
AC009963.3-201ENST00000458090 SMARCA4P51532 1647 aa12□□□□□ -0.49
AC009963.3-201ENST00000458090 CUX2O14529 1486 aa12□□□□□ -0.49
AC009963.3-201ENST00000458090 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
AC009963.3-201ENST00000458090 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
AC009963.3-201ENST00000458090 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
AC009963.3-201ENST00000458090 BAZ1AQ9NRL2 1556 aaPredicted RBP11.97□□□□□ -0.49
AC009963.3-201ENST00000458090 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
AC009963.3-201ENST00000458090 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
AC009963.3-201ENST00000458090 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
AC009963.3-201ENST00000458090 NESP48681 1621 aa11.81□□□□□ -0.52
AC009963.3-201ENST00000458090 MROH2BQ7Z745 1585 aa11.79□□□□□ -0.52
AC009963.3-201ENST00000458090 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
AC009963.3-201ENST00000458090 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
AC009963.3-201ENST00000458090 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
AC009963.3-201ENST00000458090 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
AC009963.3-201ENST00000458090 WIZO95785 1651 aa11.68□□□□□ -0.54
AC009963.3-201ENST00000458090 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
AC009963.3-201ENST00000458090 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
AC009963.3-201ENST00000458090 WDR62O43379 1518 aa11.6□□□□□ -0.55
AC009963.3-201ENST00000458090 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
AC009963.3-201ENST00000458090 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
AC009963.3-201ENST00000458090 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
AC009963.3-201ENST00000458090 CFTRP13569 1480 aa11.54□□□□□ -0.56
AC009963.3-201ENST00000458090 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
AC009963.3-201ENST00000458090 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
AC009963.3-201ENST00000458090 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
AC009963.3-201ENST00000458090 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
AC009963.3-201ENST00000458090 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
AC009963.3-201ENST00000458090 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
AC009963.3-201ENST00000458090 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
AC009963.3-201ENST00000458090 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
AC009963.3-201ENST00000458090 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
AC009963.3-201ENST00000458090 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
AC009963.3-201ENST00000458090 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
AC009963.3-201ENST00000458090 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
AC009963.3-201ENST00000458090 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
AC009963.3-201ENST00000458090 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
AC009963.3-201ENST00000458090 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
AC009963.3-201ENST00000458090 CHD1O14646 1710 aa11.23□□□□□ -0.61
AC009963.3-201ENST00000458090 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
AC009963.3-201ENST00000458090 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
AC009963.3-201ENST00000458090 FBLN2P98095 1184 aa11.2□□□□□ -0.62
AC009963.3-201ENST00000458090 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
AC009963.3-201ENST00000458090 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
AC009963.3-201ENST00000458090 SOGA1O94964 1423 aa11.18□□□□□ -0.62
AC009963.3-201ENST00000458090 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
AC009963.3-201ENST00000458090 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
AC009963.3-201ENST00000458090 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
AC009963.3-201ENST00000458090 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
AC009963.3-201ENST00000458090 RAD54L2Q9Y4B4 1467 aa11.12□□□□□ -0.63
AC009963.3-201ENST00000458090 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
AC009963.3-201ENST00000458090 TDRD9Q8NDG6 1382 aaKnown RBP11.12□□□□□ -0.63
AC009963.3-201ENST00000458090 GRIN2BQ13224 1484 aa11.1□□□□□ -0.63
AC009963.3-201ENST00000458090 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
AC009963.3-201ENST00000458090 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
AC009963.3-201ENST00000458090 CUX1P39880 1505 aa11.08□□□□□ -0.64
AC009963.3-201ENST00000458090 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
AC009963.3-201ENST00000458090 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
AC009963.3-201ENST00000458090 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
AC009963.3-201ENST00000458090 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
AC009963.3-201ENST00000458090 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
AC009963.3-201ENST00000458090 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
AC009963.3-201ENST00000458090 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
AC009963.3-201ENST00000458090 ABCA5Q8WWZ7 1642 aa11□□□□□ -0.65
AC009963.3-201ENST00000458090 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
AC009963.3-201ENST00000458090 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
AC009963.3-201ENST00000458090 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
AC009963.3-201ENST00000458090 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
AC009963.3-201ENST00000458090 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
AC009963.3-201ENST00000458090 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
AC009963.3-201ENST00000458090 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
AC009963.3-201ENST00000458090 NUP160Q12769 1436 aa10.88□□□□□ -0.67
AC009963.3-201ENST00000458090 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
AC009963.3-201ENST00000458090 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
AC009963.3-201ENST00000458090 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
AC009963.3-201ENST00000458090 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
AC009963.3-201ENST00000458090 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
AC009963.3-201ENST00000458090 PRG4Q92954 1404 aaPredicted RBP10.8□□□□□ -0.68
AC009963.3-201ENST00000458090 ERCC6L2Q5T890 1561 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms