RNA–Protein interactions for RNA: ENST00000457734.6

PLS1-202, Transcript of plastin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PLS1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-202ENST00000457734 NISCHQ9Y2I1 1504 aa22.08■■□□□ 1.13
PLS1-202ENST00000457734 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
PLS1-202ENST00000457734 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
PLS1-202ENST00000457734 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.59
PLS1-202ENST00000457734 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
PLS1-202ENST00000457734 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PLS1-202ENST00000457734 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
PLS1-202ENST00000457734 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
PLS1-202ENST00000457734 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
PLS1-202ENST00000457734 NACADO15069 1562 aa17.65■□□□□ 0.42
PLS1-202ENST00000457734 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
PLS1-202ENST00000457734 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
PLS1-202ENST00000457734 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.39
PLS1-202ENST00000457734 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
PLS1-202ENST00000457734 UNC13AQ9UPW8 1703 aa17.34■□□□□ 0.37
PLS1-202ENST00000457734 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
PLS1-202ENST00000457734 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
PLS1-202ENST00000457734 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
PLS1-202ENST00000457734 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
PLS1-202ENST00000457734 WIZO95785 1651 aa17.12■□□□□ 0.33
PLS1-202ENST00000457734 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
PLS1-202ENST00000457734 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
PLS1-202ENST00000457734 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
PLS1-202ENST00000457734 FAM9AQ8IZU1 332 aaPredicted RBP16.83■□□□□ 0.28
PLS1-202ENST00000457734 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
PLS1-202ENST00000457734 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
PLS1-202ENST00000457734 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
PLS1-202ENST00000457734 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
PLS1-202ENST00000457734 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
PLS1-202ENST00000457734 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
PLS1-202ENST00000457734 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
PLS1-202ENST00000457734 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
PLS1-202ENST00000457734 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
PLS1-202ENST00000457734 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
PLS1-202ENST00000457734 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
PLS1-202ENST00000457734 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
PLS1-202ENST00000457734 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
PLS1-202ENST00000457734 SOGA1O94964 1423 aa16.32■□□□□ 0.2
PLS1-202ENST00000457734 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
PLS1-202ENST00000457734 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
PLS1-202ENST00000457734 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
PLS1-202ENST00000457734 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
PLS1-202ENST00000457734 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
PLS1-202ENST00000457734 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
PLS1-202ENST00000457734 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
PLS1-202ENST00000457734 NESP48681 1621 aa16.16■□□□□ 0.18
PLS1-202ENST00000457734 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
PLS1-202ENST00000457734 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
PLS1-202ENST00000457734 CFTRP13569 1480 aa16.12■□□□□ 0.17
PLS1-202ENST00000457734 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
PLS1-202ENST00000457734 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
PLS1-202ENST00000457734 CUX1P39880 1505 aa16.05■□□□□ 0.16
PLS1-202ENST00000457734 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
PLS1-202ENST00000457734 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
PLS1-202ENST00000457734 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
PLS1-202ENST00000457734 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
PLS1-202ENST00000457734 CEP162Q5TB80 1403 aa15.89■□□□□ 0.14
PLS1-202ENST00000457734 FGD5Q6ZNL6 1462 aa15.87■□□□□ 0.13
PLS1-202ENST00000457734 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
PLS1-202ENST00000457734 EEA1Q15075 1411 aa15.87■□□□□ 0.13
PLS1-202ENST00000457734 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
PLS1-202ENST00000457734 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
PLS1-202ENST00000457734 CUX2O14529 1486 aa15.85■□□□□ 0.13
PLS1-202ENST00000457734 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
PLS1-202ENST00000457734 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
PLS1-202ENST00000457734 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
PLS1-202ENST00000457734 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
PLS1-202ENST00000457734 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
PLS1-202ENST00000457734 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
PLS1-202ENST00000457734 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
PLS1-202ENST00000457734 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
PLS1-202ENST00000457734 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
PLS1-202ENST00000457734 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
PLS1-202ENST00000457734 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
PLS1-202ENST00000457734 IGF1RP08069 1367 aa15.73■□□□□ 0.11
PLS1-202ENST00000457734 KIF21BO75037 1637 aa15.73■□□□□ 0.11
PLS1-202ENST00000457734 CLIP1P30622 1438 aa15.72■□□□□ 0.11
PLS1-202ENST00000457734 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.1
PLS1-202ENST00000457734 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
PLS1-202ENST00000457734 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
PLS1-202ENST00000457734 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
PLS1-202ENST00000457734 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
PLS1-202ENST00000457734 HRCP23327 699 aa15.59■□□□□ 0.09
PLS1-202ENST00000457734 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
PLS1-202ENST00000457734 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.09
PLS1-202ENST00000457734 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.08
PLS1-202ENST00000457734 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
PLS1-202ENST00000457734 APLP2Q06481 763 aa15.55■□□□□ 0.08
PLS1-202ENST00000457734 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
PLS1-202ENST00000457734 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.08
PLS1-202ENST00000457734 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
PLS1-202ENST00000457734 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
PLS1-202ENST00000457734 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.07
PLS1-202ENST00000457734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
PLS1-202ENST00000457734 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
PLS1-202ENST00000457734 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
PLS1-202ENST00000457734 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
PLS1-202ENST00000457734 FBLN2P98095 1184 aa15.47■□□□□ 0.07
PLS1-202ENST00000457734 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.07
PLS1-202ENST00000457734 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms