RNA–Protein interactions for RNA: ENST00000457723.1

SLC6A8-206, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 266 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-206ENST00000457723 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.67□□□□□ -0.062e-35■■■□□ 17.1
SLC6A8-206ENST00000457723 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.332e-27■□□□□ 8.9
SLC6A8-206ENST00000457723 SF3B4Q15427 424 aaKnown RBP eCLIP11.32□□□□□ -0.61e-26■■■■■ 27.3
SLC6A8-206ENST00000457723 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.241e-25■■■■■ 40.5
SLC6A8-206ENST00000457723 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.595e-21■□□□□ 8.4
SLC6A8-206ENST00000457723 METAP2P50579 478 aaKnown RBP eCLIP14.06□□□□□ -0.165e-20■□□□□ 11.3
SLC6A8-206ENST00000457723 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.361e-18■□□□□ 8.8
SLC6A8-206ENST00000457723 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.95□□□□□ -0.024e-18■■■■□ 19.7
SLC6A8-206ENST00000457723 PRPF4O43172 522 aaKnown RBP eCLIP11.76□□□□□ -0.534e-17■■■■■ 27
SLC6A8-206ENST00000457723 RBFOX2O43251 390 aaKnown RBP eCLIP9.23□□□□□ -0.936e-15■□□□□ 9
SLC6A8-206ENST00000457723 SF3A3Q12874 501 aaKnown RBP eCLIP10.32□□□□□ -0.765e-14■■■■■ 49.4
SLC6A8-206ENST00000457723 SUB1P53999 127 aaKnown RBP eCLIP8.98□□□□□ -0.974e-13■□□□□ 10.9
SLC6A8-206ENST00000457723 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.625e-13■■■□□ 17.6
SLC6A8-206ENST00000457723 EFTUD2Q15029 972 aaKnown RBP eCLIP11.49□□□□□ -0.576e-13■■■■□ 21.8
SLC6A8-206ENST00000457723 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.442e-12■■■■□ 26.5
SLC6A8-206ENST00000457723 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.467e-12■■■■■ 45
SLC6A8-206ENST00000457723 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.16■□□□□ 0.021e-11■■□□□ 14.5
SLC6A8-206ENST00000457723 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.061e-9■■■□□ 15.5
SLC6A8-206ENST00000457723 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.35e-9■■■■□ 23
SLC6A8-206ENST00000457723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.54□□□□□ -0.567e-9■■□□□ 13
SLC6A8-206ENST00000457723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.16□□□□□ -0.627e-9■■■□□ 15.1
SLC6A8-206ENST00000457723 NIPBLQ6KC79 2804 aaeCLIP11.43□□□□□ -0.581e-8■□□□□ 8.1
SLC6A8-206ENST00000457723 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.14□□□□□ -0.473e-8■■■□□ 15.4
SLC6A8-206ENST00000457723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.8□□□□□ -0.685e-8■■□□□ 12.4
SLC6A8-206ENST00000457723 ZRANB2O95218 330 aaKnown RBP eCLIP12.06□□□□□ -0.481e-7■■■■□ 19.3
SLC6A8-206ENST00000457723 IGF2BP3O00425 579 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■□□□□ 9.3
SLC6A8-206ENST00000457723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.325e-7■■■■□ 22.9
SLC6A8-206ENST00000457723 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.158e-7■■■■□ 23.4
SLC6A8-206ENST00000457723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■□□□ 12.6
SLC6A8-206ENST00000457723 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.094e-6■■□□□ 12.4
SLC6A8-206ENST00000457723 RPS3P23396 243 aaKnown RBP eCLIP11.83□□□□□ -0.526e-6■■□□□ 13.1
Retrieved 31 of 31 RNA–protein pairs in 24.5 ms