RNA–Protein interactions for RNA: ENST00000457654.6

PSMD11-202, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PSMD11, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-202ENST00000457654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.51■■□□□ 1.032e-20■■■■■ 219.3
PSMD11-202ENST00000457654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.51■□□□□ 0.712e-12■■■■■ 125.8
PSMD11-202ENST00000457654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.38■□□□□ 0.378e-6■■■■■ 36.8
PSMD11-202ENST00000457654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.03■□□□□ -09e-7■■■■■ 29.6
PSMD11-202ENST00000457654 SF3B1O75533 1304 aaKnown RBP eCLIP19.47■□□□□ 0.712e-7■■■■■ 28.2
PSMD11-202ENST00000457654 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.014e-14■■■■□ 23.6
PSMD11-202ENST00000457654 EFTUD2Q15029 972 aaKnown RBP eCLIP18■□□□□ 0.479e-7■■■■□ 22.9
PSMD11-202ENST00000457654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.73■□□□□ 0.752e-7■■■■□ 22.4
PSMD11-202ENST00000457654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.97■■□□□ 1.919e-7■■■■□ 22.1
PSMD11-202ENST00000457654 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.462e-6■■■■□ 21.5
PSMD11-202ENST00000457654 TIA1P31483 386 aaKnown RBP eCLIP17.21■□□□□ 0.354e-7■■■■□ 20.4
PSMD11-202ENST00000457654 HNRNPLP14866 589 aaKnown RBP eCLIP18.48■□□□□ 0.552e-6■■■■□ 19.9
PSMD11-202ENST00000457654 SF3B4Q15427 424 aaKnown RBP eCLIP16.21■□□□□ 0.194e-7■■■■□ 19.6
PSMD11-202ENST00000457654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.54e-8■■■■□ 19.3
PSMD11-202ENST00000457654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.91■□□□□ 0.621e-9■■■□□ 19.2
PSMD11-202ENST00000457654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.43■■□□□ 1.022e-9■■■□□ 18.1
PSMD11-202ENST00000457654 PABPC4Q13310 644 aaKnown RBP eCLIP21.08■□□□□ 0.972e-15■■■□□ 16.4
PSMD11-202ENST00000457654 G3BP1Q13283 466 aaKnown RBP eCLIP22.49■■□□□ 1.198e-7■■■□□ 15.9
PSMD11-202ENST00000457654 TIAL1Q01085 375 aaKnown RBP eCLIP17.87■□□□□ 0.455e-8■■■□□ 15.7
PSMD11-202ENST00000457654 GPKOWQ92917 476 aaPredicted RBP eCLIP20.97■□□□□ 0.959e-8■■■□□ 15.2
PSMD11-202ENST00000457654 SUB1P53999 127 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■□□□ 14.5
PSMD11-202ENST00000457654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.33■□□□□ 0.682e-6■■□□□ 14.5
PSMD11-202ENST00000457654 KHSRPQ92945 711 aaKnown RBP eCLIP19.05■□□□□ 0.642e-6■■□□□ 14.3
PSMD11-202ENST00000457654 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.98■■□□□ 1.114e-8■■□□□ 14.2
PSMD11-202ENST00000457654 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.74■□□□□ 0.756e-13■■□□□ 12.8
PSMD11-202ENST00000457654 YBX3P16989 372 aaKnown RBP eCLIP22.29■■□□□ 1.163e-6■■□□□ 12.4
PSMD11-202ENST00000457654 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.16■□□□□ 0.344e-14■■□□□ 12.3
PSMD11-202ENST00000457654 SF3A3Q12874 501 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■□□□ 11.7
PSMD11-202ENST00000457654 DDX3XO00571 662 aaKnown RBP eCLIP19.21■□□□□ 0.671e-15■■□□□ 11.6
PSMD11-202ENST00000457654 RPS3P23396 243 aaKnown RBP eCLIP17.94■□□□□ 0.469e-7■■□□□ 11.4
PSMD11-202ENST00000457654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.08■□□□□ 0.648e-9■□□□□ 11.2
PSMD11-202ENST00000457654 PPIGQ13427 754 aaKnown RBP eCLIP19.81■□□□□ 0.767e-11■□□□□ 11.2
PSMD11-202ENST00000457654 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.332e-7■□□□□ 10.9
PSMD11-202ENST00000457654 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.927e-10■□□□□ 9.9
PSMD11-202ENST00000457654 ZNF622Q969S3 477 aaKnown RBP eCLIP22.53■■□□□ 1.21e-8■□□□□ 9.8
PSMD11-202ENST00000457654 RBM15Q96T37 977 aaKnown RBP eCLIP18.38■□□□□ 0.533e-6■□□□□ 8.8
PSMD11-202ENST00000457654 ILF3Q12906 894 aaKnown RBP eCLIP17.81■□□□□ 0.444e-8■□□□□ 8.8
Retrieved 37 of 37 RNA–protein pairs in 11.1 ms