RNA–Protein interactions for RNA: ENST00000457354.6

TMX1-201, Transcript of thioredoxin related transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMX1, Length 3,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX1-201ENST00000457354 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.44
TMX1-201ENST00000457354 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
TMX1-201ENST00000457354 SHROOM4Q9ULL8 1493 aa22.45■■□□□ 1.18
TMX1-201ENST00000457354 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
TMX1-201ENST00000457354 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
TMX1-201ENST00000457354 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
TMX1-201ENST00000457354 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
TMX1-201ENST00000457354 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
TMX1-201ENST00000457354 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
TMX1-201ENST00000457354 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
TMX1-201ENST00000457354 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
TMX1-201ENST00000457354 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
TMX1-201ENST00000457354 HRCP23327 699 aa20.4■□□□□ 0.86
TMX1-201ENST00000457354 RANGAP1P46060 587 aaPredicted RBP20.2■□□□□ 0.82
TMX1-201ENST00000457354 TRIM26Q12899 539 aaPredicted RBP20.17■□□□□ 0.82
TMX1-201ENST00000457354 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
TMX1-201ENST00000457354 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.8
TMX1-201ENST00000457354 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
TMX1-201ENST00000457354 APLP2Q06481 763 aa19.97■□□□□ 0.79
TMX1-201ENST00000457354 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
TMX1-201ENST00000457354 ABCC9O60706 1549 aa19.96■□□□□ 0.79
TMX1-201ENST00000457354 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
TMX1-201ENST00000457354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
TMX1-201ENST00000457354 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
TMX1-201ENST00000457354 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
TMX1-201ENST00000457354 YTHDC1Q96MU7 727 aaKnown RBP19.64■□□□□ 0.73
TMX1-201ENST00000457354 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
TMX1-201ENST00000457354 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
TMX1-201ENST00000457354 ATP1B4Q9UN42 357 aaPredicted RBP19.55■□□□□ 0.72
TMX1-201ENST00000457354 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
TMX1-201ENST00000457354 ITGAEP38570 1179 aa19.42■□□□□ 0.7
TMX1-201ENST00000457354 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
TMX1-201ENST00000457354 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
TMX1-201ENST00000457354 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
TMX1-201ENST00000457354 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
TMX1-201ENST00000457354 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
TMX1-201ENST00000457354 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
TMX1-201ENST00000457354 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
TMX1-201ENST00000457354 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
TMX1-201ENST00000457354 ZNF316A6NFI3 1004 aaPredicted RBP18.93■□□□□ 0.62
TMX1-201ENST00000457354 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
TMX1-201ENST00000457354 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
TMX1-201ENST00000457354 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
TMX1-201ENST00000457354 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
TMX1-201ENST00000457354 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
TMX1-201ENST00000457354 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
TMX1-201ENST00000457354 CEP162Q5TB80 1403 aa18.78■□□□□ 0.6
TMX1-201ENST00000457354 NACADO15069 1562 aa18.78■□□□□ 0.6
TMX1-201ENST00000457354 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
TMX1-201ENST00000457354 SOGA1O94964 1423 aa18.73■□□□□ 0.59
TMX1-201ENST00000457354 NEFLP07196 543 aa18.71■□□□□ 0.59
TMX1-201ENST00000457354 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
TMX1-201ENST00000457354 CLIP1P30622 1438 aa18.65■□□□□ 0.58
TMX1-201ENST00000457354 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
TMX1-201ENST00000457354 WIZO95785 1651 aa18.64■□□□□ 0.58
TMX1-201ENST00000457354 MIER1Q8N108 512 aa18.64■□□□□ 0.57
TMX1-201ENST00000457354 CCDC88BA6NC98 1476 aa18.64■□□□□ 0.57
TMX1-201ENST00000457354 BCANQ96GW7 911 aa18.63■□□□□ 0.57
TMX1-201ENST00000457354 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
TMX1-201ENST00000457354 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
TMX1-201ENST00000457354 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
TMX1-201ENST00000457354 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.56
TMX1-201ENST00000457354 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
TMX1-201ENST00000457354 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
TMX1-201ENST00000457354 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
TMX1-201ENST00000457354 EEA1Q15075 1411 aa18.47■□□□□ 0.55
TMX1-201ENST00000457354 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
TMX1-201ENST00000457354 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
TMX1-201ENST00000457354 DDX10Q13206 875 aaKnown RBP18.43■□□□□ 0.54
TMX1-201ENST00000457354 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
TMX1-201ENST00000457354 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
TMX1-201ENST00000457354 ANP32CO43423 234 aa18.34■□□□□ 0.53
TMX1-201ENST00000457354 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
TMX1-201ENST00000457354 FBLN2P98095 1184 aa18.32■□□□□ 0.52
TMX1-201ENST00000457354 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
TMX1-201ENST00000457354 CHIC2Q9UKJ5 165 aa18.3■□□□□ 0.52
TMX1-201ENST00000457354 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
TMX1-201ENST00000457354 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
TMX1-201ENST00000457354 FKBP8Q14318 412 aa18.21■□□□□ 0.51
TMX1-201ENST00000457354 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
TMX1-201ENST00000457354 VPS8Q8N3P4 1428 aa18.19■□□□□ 0.5
TMX1-201ENST00000457354 MYT1Q01538 1121 aa18.18■□□□□ 0.5
TMX1-201ENST00000457354 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
TMX1-201ENST00000457354 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
TMX1-201ENST00000457354 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
TMX1-201ENST00000457354 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
TMX1-201ENST00000457354 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
TMX1-201ENST00000457354 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
TMX1-201ENST00000457354 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
TMX1-201ENST00000457354 HNRNPUQ00839 825 aaKnown RBP eCLIP18.09■□□□□ 0.49
TMX1-201ENST00000457354 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
TMX1-201ENST00000457354 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
TMX1-201ENST00000457354 CUX2O14529 1486 aa18.06■□□□□ 0.48
TMX1-201ENST00000457354 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
TMX1-201ENST00000457354 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
TMX1-201ENST00000457354 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
TMX1-201ENST00000457354 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.47
TMX1-201ENST00000457354 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.47
TMX1-201ENST00000457354 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
TMX1-201ENST00000457354 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms