RNA–Protein interactions for RNA: ENST00000457085.1

SMS-203, Transcript of spermine synthase, humanhuman

TSL 5

Gene SMS, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-203ENST00000457085 NISCHQ9Y2I1 1504 aa61.42■■■■■ 7.42
SMS-203ENST00000457085 CCDC180Q9P1Z9 1646 aa54.66■■■■■ 6.34
SMS-203ENST00000457085 ABCC9O60706 1549 aa53.55■■■■■ 6.16
SMS-203ENST00000457085 RB1CC1Q8TDY2 1594 aa51.52■■■■■ 5.84
SMS-203ENST00000457085 NACADO15069 1562 aa51.44■■■■■ 5.82
SMS-203ENST00000457085 DCAF8L2P0C7V8 631 aa51.42■■■■■ 5.82
SMS-203ENST00000457085 ZCCHC6Q5VYS8 1495 aaKnown RBP51.11■■■■■ 5.77
SMS-203ENST00000457085 MYO15BQ96JP2 1530 aa51.1■■■■■ 5.77
SMS-203ENST00000457085 DCAF1Q9Y4B6 1507 aa50.83■■■■■ 5.73
SMS-203ENST00000457085 UNC13AQ9UPW8 1703 aa50.29■■■■■ 5.64
SMS-203ENST00000457085 PABPN1Q86U42 306 aaKnown RBP eCLIP50.03■■■■■ 5.6
SMS-203ENST00000457085 BICRAQ9NZM4 1560 aa49.89■■■■■ 5.58
SMS-203ENST00000457085 SCRIBQ14160 1630 aa49.82■■■■■ 5.57
SMS-203ENST00000457085 SHROOM4Q9ULL8 1493 aa49.44■■■■■ 5.51
SMS-203ENST00000457085 DNAJC5BQ9UF47 199 aa49.21■■■■■ 5.47
SMS-203ENST00000457085 EIF4G1Q04637 1599 aaKnown RBP48.61■■■■■ 5.37
SMS-203ENST00000457085 CC2D2AQ9P2K1 1620 aa48.44■■■■■ 5.35
SMS-203ENST00000457085 CECR2Q9BXF3 1484 aa48.15■■■■■ 5.3
SMS-203ENST00000457085 SMARCA4P51532 1647 aa47.67■■■■■ 5.22
SMS-203ENST00000457085 BAZ1AQ9NRL2 1556 aaPredicted RBP47.63■■■■■ 5.22
SMS-203ENST00000457085 NCAPD3P42695 1498 aa47.46■■■■■ 5.19
SMS-203ENST00000457085 ATAD2BQ9ULI0 1458 aa47.45■■■■■ 5.19
SMS-203ENST00000457085 SMARCA2P51531 1590 aa47.41■■■■■ 5.18
SMS-203ENST00000457085 MROH2BQ7Z745 1585 aa47.3■■■■■ 5.16
SMS-203ENST00000457085 PEG3Q9GZU2 1588 aa47.21■■■■■ 5.15
SMS-203ENST00000457085 HMGXB3Q12766 1538 aa47.2■■■■■ 5.15
SMS-203ENST00000457085 BAZ1BQ9UIG0 1483 aaKnown RBP47.07■■■■■ 5.13
SMS-203ENST00000457085 WIZO95785 1651 aa46.79■■■■■ 5.08
SMS-203ENST00000457085 RSF1Q96T23 1441 aaPredicted RBP46.75■■■■■ 5.07
SMS-203ENST00000457085 TOP2AP11388 1531 aaKnown RBP46.31■■■■■ 5
SMS-203ENST00000457085 NESP48681 1621 aa46.28■■■■■ 5
SMS-203ENST00000457085 LAMC3Q9Y6N6 1575 aa46.22■■■■■ 4.99
SMS-203ENST00000457085 ERCC6Q03468 1493 aa46.21■■■■■ 4.99
SMS-203ENST00000457085 CADPSQ9ULU8 1353 aa46.08■■■■■ 4.97
SMS-203ENST00000457085 PDS5BQ9NTI5 1447 aa45.94■■■■■ 4.95
SMS-203ENST00000457085 CCDC88BA6NC98 1476 aa45.77■■■■■ 4.92
SMS-203ENST00000457085 CFTRP13569 1480 aa45.76■■■■■ 4.92
SMS-203ENST00000457085 CUX2O14529 1486 aa45.75■■■■■ 4.91
SMS-203ENST00000457085 KIF21AQ7Z4S6 1674 aa45.75■■■■■ 4.91
SMS-203ENST00000457085 THOC2Q8NI27 1593 aaKnown RBP45.61■■■■■ 4.89
SMS-203ENST00000457085 FANCD2Q9BXW9 1451 aa45.54■■■■■ 4.88
SMS-203ENST00000457085 SUPT5HO00267 1087 aaKnown RBP45.53■■■■■ 4.88
SMS-203ENST00000457085 CEP164Q9UPV0 1460 aa45.49■■■■■ 4.87
SMS-203ENST00000457085 MRC2Q9UBG0 1479 aa45.44■■■■■ 4.87
SMS-203ENST00000457085 PRDM2Q13029 1718 aa45.41■■■■■ 4.86
SMS-203ENST00000457085 WDR62O43379 1518 aa45.27■■■■■ 4.84
SMS-203ENST00000457085 URB2Q14146 1524 aaKnown RBP45.05■■■■■ 4.8
SMS-203ENST00000457085 ABCC8Q09428 1581 aa44.85■■■■■ 4.77
SMS-203ENST00000457085 TOPBP1Q92547 1522 aa44.78■■■■■ 4.76
SMS-203ENST00000457085 DNMBPQ6XZF7 1577 aa44.73■■■■■ 4.75
SMS-203ENST00000457085 IFT140Q96RY7 1462 aa44.54■■■■■ 4.72
SMS-203ENST00000457085 DNAJC5Q9H3Z4 198 aa44.47■■■■■ 4.71
SMS-203ENST00000457085 POLA1P09884 1462 aaPredicted RBP44.39■■■■■ 4.7
SMS-203ENST00000457085 CUX1P39880 1505 aa44.39■■■■■ 4.7
SMS-203ENST00000457085 ZNF608Q9ULD9 1512 aaPredicted RBP44.29■■■■■ 4.68
SMS-203ENST00000457085 TARBP1Q13395 1621 aaKnown RBP44.28■■■■■ 4.68
SMS-203ENST00000457085 FGD5Q6ZNL6 1462 aa44.27■■■■■ 4.68
SMS-203ENST00000457085 SOGA1O94964 1423 aa44.24■■■■■ 4.67
SMS-203ENST00000457085 RAD54L2Q9Y4B4 1467 aa44.18■■■■■ 4.66
SMS-203ENST00000457085 EIF4G3O43432 1585 aaKnown RBP44.14■■■■■ 4.66
SMS-203ENST00000457085 WRNQ14191 1432 aaPredicted RBP eCLIP44.11■■■■■ 4.65
SMS-203ENST00000457085 AQRO60306 1485 aaKnown RBP eCLIP44.07■■■■■ 4.65
SMS-203ENST00000457085 TOP2BQ02880 1626 aa44■■■■■ 4.63
SMS-203ENST00000457085 WDR97A6NE52 1622 aa43.99■■■■■ 4.63
SMS-203ENST00000457085 BIVM-ERCC5R4GMW8 1640 aa43.99■■■■■ 4.63
SMS-203ENST00000457085 TDRD9Q8NDG6 1382 aaKnown RBP43.98■■■■■ 4.63
SMS-203ENST00000457085 SYNJ1O43426 1573 aa43.95■■■■■ 4.63
SMS-203ENST00000457085 OSCARQ8IYS5 282 aa43.89■■■■■ 4.62
SMS-203ENST00000457085 ABCA10Q8WWZ4 1543 aa43.85■■■■■ 4.61
SMS-203ENST00000457085 GRIN2BQ13224 1484 aa43.73■■■■■ 4.59
SMS-203ENST00000457085 GAPVD1Q14C86 1478 aa43.72■■■■■ 4.59
SMS-203ENST00000457085 ABCA5Q8WWZ7 1642 aa43.66■■■■■ 4.58
SMS-203ENST00000457085 SNAPC4Q5SXM2 1469 aa43.65■■■■■ 4.58
SMS-203ENST00000457085 MAGI1Q96QZ7 1491 aaPredicted RBP43.64■■■■■ 4.58
SMS-203ENST00000457085 FBLN2P98095 1184 aa43.62■■■■■ 4.57
SMS-203ENST00000457085 CHD1O14646 1710 aa43.6■■■■■ 4.57
SMS-203ENST00000457085 PBRM1Q86U86 1689 aa43.6■■■■■ 4.57
SMS-203ENST00000457085 CHMP7Q8WUX9 453 aaPredicted RBP43.49■■■■■ 4.55
SMS-203ENST00000457085 SYNJ2O15056 1496 aa43.45■■■■■ 4.55
SMS-203ENST00000457085 ERICH3Q5RHP9 1530 aa43.34■■■■■ 4.53
SMS-203ENST00000457085 ADAMTS12P58397 1594 aa43.25■■■■■ 4.51
SMS-203ENST00000457085 KIF27Q86VH2 1401 aa43.22■■■■■ 4.51
SMS-203ENST00000457085 FHAD1B1AJZ9 1412 aa43.22■■■■■ 4.51
SMS-203ENST00000457085 GRIN2AQ12879 1464 aa43.16■■■■■ 4.5
SMS-203ENST00000457085 CLASP1Q7Z460 1538 aa43.12■■■■■ 4.49
SMS-203ENST00000457085 RIMBP3CA6NJZ7 1639 aa43.11■■■■■ 4.49
SMS-203ENST00000457085 RIMBP3BA6NNM3 1639 aa43.11■■■■■ 4.49
SMS-203ENST00000457085 RIMBP3Q9UFD9 1639 aa43.11■■■■■ 4.49
SMS-203ENST00000457085 ARHGEF11O15085 1522 aa43.1■■■■■ 4.49
SMS-203ENST00000457085 TRIM41Q8WV44 630 aa43.05■■■■■ 4.48
SMS-203ENST00000457085 IGF1RP08069 1367 aa43.03■■■■■ 4.48
SMS-203ENST00000457085 NUP160Q12769 1436 aa42.96■■■■■ 4.47
SMS-203ENST00000457085 CUL7Q14999 1698 aa42.92■■■■■ 4.46
SMS-203ENST00000457085 CEP170Q5SW79 1584 aa42.91■■■■■ 4.46
SMS-203ENST00000457085 CARMIL1Q5VZK9 1371 aa42.78■■■■■ 4.44
SMS-203ENST00000457085 CYB5RLQ6IPT4 315 aa42.76■■■■■ 4.44
SMS-203ENST00000457085 ARAP1Q96P48 1450 aa42.73■■■■■ 4.43
SMS-203ENST00000457085 RUSC2Q8N2Y8 1516 aa42.71■■■■■ 4.43
SMS-203ENST00000457085 SHROOM2Q13796 1616 aa42.64■■■■■ 4.42
SMS-203ENST00000457085 JPH4Q96JJ6 628 aa42.57■■■■■ 4.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms