RNA–Protein interactions for RNA: ENST00000457077.1

RAB43-206, Transcript of RAB43, member RAS oncogene family, humanhuman

TSL 4

Gene RAB43, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-206ENST00000457077 NISCHQ9Y2I1 1504 aa45.57■■■■■ 4.88
RAB43-206ENST00000457077 CCDC180Q9P1Z9 1646 aa40.69■■■■■ 4.1
RAB43-206ENST00000457077 ABCC9O60706 1549 aa40.28■■■■■ 4.04
RAB43-206ENST00000457077 RB1CC1Q8TDY2 1594 aa38.48■■■■□ 3.75
RAB43-206ENST00000457077 NACADO15069 1562 aa38.36■■■■□ 3.73
RAB43-206ENST00000457077 MYO15BQ96JP2 1530 aa38.05■■■■□ 3.68
RAB43-206ENST00000457077 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
RAB43-206ENST00000457077 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
RAB43-206ENST00000457077 UNC13AQ9UPW8 1703 aa37.75■■■■□ 3.63
RAB43-206ENST00000457077 DCAF1Q9Y4B6 1507 aa37.7■■■■□ 3.63
RAB43-206ENST00000457077 DNAJC5BQ9UF47 199 aa37.62■■■■□ 3.61
RAB43-206ENST00000457077 BICRAQ9NZM4 1560 aa37.55■■■■□ 3.6
RAB43-206ENST00000457077 PABPN1Q86U42 306 aaKnown RBP eCLIP37.54■■■■□ 3.6
RAB43-206ENST00000457077 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
RAB43-206ENST00000457077 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
RAB43-206ENST00000457077 EIF4G1Q04637 1599 aaKnown RBP36.49■■■■□ 3.43
RAB43-206ENST00000457077 CC2D2AQ9P2K1 1620 aa36.45■■■■□ 3.43
RAB43-206ENST00000457077 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
RAB43-206ENST00000457077 NCAPD3P42695 1498 aa35.47■■■■□ 3.27
RAB43-206ENST00000457077 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
RAB43-206ENST00000457077 ATAD2BQ9ULI0 1458 aa35.41■■■■□ 3.26
RAB43-206ENST00000457077 BAZ1AQ9NRL2 1556 aaPredicted RBP35.27■■■■□ 3.24
RAB43-206ENST00000457077 SMARCA2P51531 1590 aa35.23■■■■□ 3.23
RAB43-206ENST00000457077 HMGXB3Q12766 1538 aa35.22■■■■□ 3.23
RAB43-206ENST00000457077 PEG3Q9GZU2 1588 aa35.18■■■■□ 3.22
RAB43-206ENST00000457077 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
RAB43-206ENST00000457077 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
RAB43-206ENST00000457077 NESP48681 1621 aa34.8■■■■□ 3.16
RAB43-206ENST00000457077 WIZO95785 1651 aa34.7■■■■□ 3.15
RAB43-206ENST00000457077 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
RAB43-206ENST00000457077 CUX2O14529 1486 aa34.57■■■■□ 3.12
RAB43-206ENST00000457077 RSF1Q96T23 1441 aaPredicted RBP34.54■■■■□ 3.12
RAB43-206ENST00000457077 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
RAB43-206ENST00000457077 THOC2Q8NI27 1593 aaKnown RBP34.39■■■■□ 3.1
RAB43-206ENST00000457077 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
RAB43-206ENST00000457077 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
RAB43-206ENST00000457077 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
RAB43-206ENST00000457077 PDS5BQ9NTI5 1447 aa34.25■■■■□ 3.07
RAB43-206ENST00000457077 DNAJC5Q9H3Z4 198 aa34.14■■■■□ 3.06
RAB43-206ENST00000457077 CFTRP13569 1480 aa34.09■■■■□ 3.05
RAB43-206ENST00000457077 MRC2Q9UBG0 1479 aa34■■■■□ 3.03
RAB43-206ENST00000457077 WDR62O43379 1518 aa33.98■■■■□ 3.03
RAB43-206ENST00000457077 FANCD2Q9BXW9 1451 aa33.94■■■■□ 3.02
RAB43-206ENST00000457077 CCDC88BA6NC98 1476 aa33.9■■■■□ 3.02
RAB43-206ENST00000457077 CEP164Q9UPV0 1460 aa33.9■■■■□ 3.02
RAB43-206ENST00000457077 URB2Q14146 1524 aaKnown RBP33.73■■■□□ 2.99
RAB43-206ENST00000457077 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
RAB43-206ENST00000457077 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
RAB43-206ENST00000457077 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.92
RAB43-206ENST00000457077 ZNF608Q9ULD9 1512 aaPredicted RBP33.24■■■□□ 2.91
RAB43-206ENST00000457077 IFT140Q96RY7 1462 aa33.24■■■□□ 2.91
RAB43-206ENST00000457077 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
RAB43-206ENST00000457077 TARBP1Q13395 1621 aaKnown RBP33.12■■■□□ 2.89
RAB43-206ENST00000457077 POLA1P09884 1462 aaPredicted RBP33.07■■■□□ 2.88
RAB43-206ENST00000457077 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
RAB43-206ENST00000457077 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
RAB43-206ENST00000457077 CUX1P39880 1505 aa32.99■■■□□ 2.87
RAB43-206ENST00000457077 OSCARQ8IYS5 282 aa32.95■■■□□ 2.87
RAB43-206ENST00000457077 RAD54L2Q9Y4B4 1467 aa32.94■■■□□ 2.86
RAB43-206ENST00000457077 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.86
RAB43-206ENST00000457077 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
RAB43-206ENST00000457077 SOGA1O94964 1423 aa32.85■■■□□ 2.85
RAB43-206ENST00000457077 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.83
RAB43-206ENST00000457077 WDR97A6NE52 1622 aa32.73■■■□□ 2.83
RAB43-206ENST00000457077 CHD1O14646 1710 aa32.69■■■□□ 2.82
RAB43-206ENST00000457077 RIMBP3CA6NJZ7 1639 aa32.62■■■□□ 2.81
RAB43-206ENST00000457077 RIMBP3BA6NNM3 1639 aa32.62■■■□□ 2.81
RAB43-206ENST00000457077 RIMBP3Q9UFD9 1639 aa32.62■■■□□ 2.81
RAB43-206ENST00000457077 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
RAB43-206ENST00000457077 SNAPC4Q5SXM2 1469 aa32.6■■■□□ 2.81
RAB43-206ENST00000457077 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
RAB43-206ENST00000457077 ARHGEF11O15085 1522 aa32.55■■■□□ 2.8
RAB43-206ENST00000457077 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
RAB43-206ENST00000457077 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
RAB43-206ENST00000457077 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
RAB43-206ENST00000457077 TOP2BQ02880 1626 aa32.52■■■□□ 2.8
RAB43-206ENST00000457077 ABCA5Q8WWZ7 1642 aa32.52■■■□□ 2.8
RAB43-206ENST00000457077 MAGI1Q96QZ7 1491 aaPredicted RBP32.51■■■□□ 2.79
RAB43-206ENST00000457077 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
RAB43-206ENST00000457077 GAPVD1Q14C86 1478 aa32.47■■■□□ 2.79
RAB43-206ENST00000457077 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
RAB43-206ENST00000457077 CLASP1Q7Z460 1538 aa32.42■■■□□ 2.78
RAB43-206ENST00000457077 FBLN2P98095 1184 aa32.42■■■□□ 2.78
RAB43-206ENST00000457077 SYNJ2O15056 1496 aa32.4■■■□□ 2.78
RAB43-206ENST00000457077 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
RAB43-206ENST00000457077 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
RAB43-206ENST00000457077 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
RAB43-206ENST00000457077 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
RAB43-206ENST00000457077 CYB5RLQ6IPT4 315 aa32.15■■■□□ 2.74
RAB43-206ENST00000457077 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
RAB43-206ENST00000457077 NUP160Q12769 1436 aa32.09■■■□□ 2.73
RAB43-206ENST00000457077 CEP170Q5SW79 1584 aa32.08■■■□□ 2.73
RAB43-206ENST00000457077 FHAD1B1AJZ9 1412 aa32.08■■■□□ 2.73
RAB43-206ENST00000457077 ERCC6L2Q5T890 1561 aa31.97■■■□□ 2.71
RAB43-206ENST00000457077 SHROOM2Q13796 1616 aa31.93■■■□□ 2.7
RAB43-206ENST00000457077 IGF1RP08069 1367 aa31.85■■■□□ 2.69
RAB43-206ENST00000457077 KIF27Q86VH2 1401 aa31.78■■■□□ 2.68
RAB43-206ENST00000457077 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
RAB43-206ENST00000457077 CUL7Q14999 1698 aa31.7■■■□□ 2.66
RAB43-206ENST00000457077 PRG4Q92954 1404 aaPredicted RBP31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms