RNA–Protein interactions for RNA: ENST00000456518.3

SCMH1-211, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-211ENST00000456518 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
SCMH1-211ENST00000456518 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
SCMH1-211ENST00000456518 ABCC9O60706 1549 aa19.26■□□□□ 0.67
SCMH1-211ENST00000456518 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
SCMH1-211ENST00000456518 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
SCMH1-211ENST00000456518 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
SCMH1-211ENST00000456518 NACADO15069 1562 aa18.63■□□□□ 0.57
SCMH1-211ENST00000456518 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
SCMH1-211ENST00000456518 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
SCMH1-211ENST00000456518 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
SCMH1-211ENST00000456518 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
SCMH1-211ENST00000456518 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
SCMH1-211ENST00000456518 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCMH1-211ENST00000456518 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
SCMH1-211ENST00000456518 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
SCMH1-211ENST00000456518 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
SCMH1-211ENST00000456518 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
SCMH1-211ENST00000456518 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
SCMH1-211ENST00000456518 BAZ1AQ9NRL2 1556 aaPredicted RBP17.44■□□□□ 0.38
SCMH1-211ENST00000456518 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
SCMH1-211ENST00000456518 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
SCMH1-211ENST00000456518 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
SCMH1-211ENST00000456518 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
SCMH1-211ENST00000456518 WIZO95785 1651 aa17.25■□□□□ 0.35
SCMH1-211ENST00000456518 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
SCMH1-211ENST00000456518 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SCMH1-211ENST00000456518 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
SCMH1-211ENST00000456518 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
SCMH1-211ENST00000456518 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.34
SCMH1-211ENST00000456518 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
SCMH1-211ENST00000456518 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
SCMH1-211ENST00000456518 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
SCMH1-211ENST00000456518 NESP48681 1621 aa16.77■□□□□ 0.28
SCMH1-211ENST00000456518 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
SCMH1-211ENST00000456518 CFTRP13569 1480 aa16.7■□□□□ 0.26
SCMH1-211ENST00000456518 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
SCMH1-211ENST00000456518 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
SCMH1-211ENST00000456518 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
SCMH1-211ENST00000456518 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
SCMH1-211ENST00000456518 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
SCMH1-211ENST00000456518 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
SCMH1-211ENST00000456518 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
SCMH1-211ENST00000456518 CUX2O14529 1486 aa16.48■□□□□ 0.23
SCMH1-211ENST00000456518 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
SCMH1-211ENST00000456518 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
SCMH1-211ENST00000456518 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
SCMH1-211ENST00000456518 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
SCMH1-211ENST00000456518 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
SCMH1-211ENST00000456518 WDR62O43379 1518 aa16.32■□□□□ 0.2
SCMH1-211ENST00000456518 CUX1P39880 1505 aa16.32■□□□□ 0.2
SCMH1-211ENST00000456518 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
SCMH1-211ENST00000456518 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
SCMH1-211ENST00000456518 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
SCMH1-211ENST00000456518 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
SCMH1-211ENST00000456518 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
SCMH1-211ENST00000456518 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
SCMH1-211ENST00000456518 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
SCMH1-211ENST00000456518 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
SCMH1-211ENST00000456518 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.18
SCMH1-211ENST00000456518 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
SCMH1-211ENST00000456518 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
SCMH1-211ENST00000456518 SOGA1O94964 1423 aa16.17■□□□□ 0.18
SCMH1-211ENST00000456518 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
SCMH1-211ENST00000456518 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
SCMH1-211ENST00000456518 ZNF608Q9ULD9 1512 aaPredicted RBP16.08■□□□□ 0.16
SCMH1-211ENST00000456518 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
SCMH1-211ENST00000456518 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
SCMH1-211ENST00000456518 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCMH1-211ENST00000456518 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
SCMH1-211ENST00000456518 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
SCMH1-211ENST00000456518 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
SCMH1-211ENST00000456518 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
SCMH1-211ENST00000456518 KIF27Q86VH2 1401 aa15.96■□□□□ 0.14
SCMH1-211ENST00000456518 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
SCMH1-211ENST00000456518 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
SCMH1-211ENST00000456518 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
SCMH1-211ENST00000456518 IGF1RP08069 1367 aa15.9■□□□□ 0.14
SCMH1-211ENST00000456518 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
SCMH1-211ENST00000456518 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
SCMH1-211ENST00000456518 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
SCMH1-211ENST00000456518 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.13
SCMH1-211ENST00000456518 EEA1Q15075 1411 aa15.81■□□□□ 0.12
SCMH1-211ENST00000456518 FBLN2P98095 1184 aa15.81■□□□□ 0.12
SCMH1-211ENST00000456518 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
SCMH1-211ENST00000456518 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
SCMH1-211ENST00000456518 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
SCMH1-211ENST00000456518 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
SCMH1-211ENST00000456518 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
SCMH1-211ENST00000456518 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
SCMH1-211ENST00000456518 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
SCMH1-211ENST00000456518 CUL7Q14999 1698 aa15.73■□□□□ 0.11
SCMH1-211ENST00000456518 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
SCMH1-211ENST00000456518 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
SCMH1-211ENST00000456518 CHD1O14646 1710 aa15.71■□□□□ 0.11
SCMH1-211ENST00000456518 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
SCMH1-211ENST00000456518 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
SCMH1-211ENST00000456518 KIF21BO75037 1637 aa15.63■□□□□ 0.09
SCMH1-211ENST00000456518 NUP160Q12769 1436 aa15.63■□□□□ 0.09
SCMH1-211ENST00000456518 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
SCMH1-211ENST00000456518 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms