RNA–Protein interactions for RNA: ENST00000456515.5

SEC22C-214, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-214ENST00000456515 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
SEC22C-214ENST00000456515 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
SEC22C-214ENST00000456515 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
SEC22C-214ENST00000456515 ABCC9O60706 1549 aa15.52■□□□□ 0.07
SEC22C-214ENST00000456515 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
SEC22C-214ENST00000456515 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
SEC22C-214ENST00000456515 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
SEC22C-214ENST00000456515 NACADO15069 1562 aa14.71□□□□□ -0.05
SEC22C-214ENST00000456515 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
SEC22C-214ENST00000456515 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
SEC22C-214ENST00000456515 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
SEC22C-214ENST00000456515 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
SEC22C-214ENST00000456515 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
SEC22C-214ENST00000456515 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
SEC22C-214ENST00000456515 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
SEC22C-214ENST00000456515 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
SEC22C-214ENST00000456515 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
SEC22C-214ENST00000456515 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
SEC22C-214ENST00000456515 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
SEC22C-214ENST00000456515 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
SEC22C-214ENST00000456515 BAZ1AQ9NRL2 1556 aaPredicted RBP13.64□□□□□ -0.23
SEC22C-214ENST00000456515 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
SEC22C-214ENST00000456515 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
SEC22C-214ENST00000456515 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
SEC22C-214ENST00000456515 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
SEC22C-214ENST00000456515 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
SEC22C-214ENST00000456515 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
SEC22C-214ENST00000456515 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
SEC22C-214ENST00000456515 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
SEC22C-214ENST00000456515 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
SEC22C-214ENST00000456515 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
SEC22C-214ENST00000456515 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
SEC22C-214ENST00000456515 WIZO95785 1651 aa13.37□□□□□ -0.27
SEC22C-214ENST00000456515 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
SEC22C-214ENST00000456515 NESP48681 1621 aa13.35□□□□□ -0.27
SEC22C-214ENST00000456515 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
SEC22C-214ENST00000456515 CUX2O14529 1486 aa13.31□□□□□ -0.28
SEC22C-214ENST00000456515 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
SEC22C-214ENST00000456515 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
SEC22C-214ENST00000456515 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
SEC22C-214ENST00000456515 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
SEC22C-214ENST00000456515 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
SEC22C-214ENST00000456515 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
SEC22C-214ENST00000456515 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
SEC22C-214ENST00000456515 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
SEC22C-214ENST00000456515 CFTRP13569 1480 aa13.06□□□□□ -0.32
SEC22C-214ENST00000456515 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
SEC22C-214ENST00000456515 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
SEC22C-214ENST00000456515 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
SEC22C-214ENST00000456515 WDR62O43379 1518 aa13□□□□□ -0.33
SEC22C-214ENST00000456515 PRDM2Q13029 1718 aa12.96□□□□□ -0.33
SEC22C-214ENST00000456515 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
SEC22C-214ENST00000456515 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
SEC22C-214ENST00000456515 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
SEC22C-214ENST00000456515 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
SEC22C-214ENST00000456515 IFT140Q96RY7 1462 aa12.76□□□□□ -0.37
SEC22C-214ENST00000456515 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
SEC22C-214ENST00000456515 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
SEC22C-214ENST00000456515 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
SEC22C-214ENST00000456515 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
SEC22C-214ENST00000456515 CUX1P39880 1505 aa12.67□□□□□ -0.38
SEC22C-214ENST00000456515 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■■■ 30.7
SEC22C-214ENST00000456515 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
SEC22C-214ENST00000456515 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-214ENST00000456515 SOGA1O94964 1423 aa12.65□□□□□ -0.38
SEC22C-214ENST00000456515 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
SEC22C-214ENST00000456515 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
SEC22C-214ENST00000456515 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
SEC22C-214ENST00000456515 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
SEC22C-214ENST00000456515 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
SEC22C-214ENST00000456515 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
SEC22C-214ENST00000456515 FBLN2P98095 1184 aa12.61□□□□□ -0.39
SEC22C-214ENST00000456515 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
SEC22C-214ENST00000456515 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
SEC22C-214ENST00000456515 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
SEC22C-214ENST00000456515 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
SEC22C-214ENST00000456515 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
SEC22C-214ENST00000456515 CHD1O14646 1710 aa12.54□□□□□ -0.4
SEC22C-214ENST00000456515 CYB5RLQ6IPT4 315 aa12.53□□□□□ -0.4
SEC22C-214ENST00000456515 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
SEC22C-214ENST00000456515 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.4
SEC22C-214ENST00000456515 ARHGEF11O15085 1522 aa12.52□□□□□ -0.41
SEC22C-214ENST00000456515 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
SEC22C-214ENST00000456515 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
SEC22C-214ENST00000456515 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
SEC22C-214ENST00000456515 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
SEC22C-214ENST00000456515 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
SEC22C-214ENST00000456515 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
SEC22C-214ENST00000456515 FOXD1Q16676 465 aa12.46□□□□□ -0.41
SEC22C-214ENST00000456515 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
SEC22C-214ENST00000456515 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
SEC22C-214ENST00000456515 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
SEC22C-214ENST00000456515 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
SEC22C-214ENST00000456515 CLASP1Q7Z460 1538 aa12.4□□□□□ -0.42
SEC22C-214ENST00000456515 ARAP1Q96P48 1450 aa12.4□□□□□ -0.43
SEC22C-214ENST00000456515 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
SEC22C-214ENST00000456515 EEA1Q15075 1411 aa12.35□□□□□ -0.43
SEC22C-214ENST00000456515 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
SEC22C-214ENST00000456515 IGF1RP08069 1367 aa12.33□□□□□ -0.44
SEC22C-214ENST00000456515 CUL7Q14999 1698 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms