RNA–Protein interactions for RNA: ENST00000455635.1

KRT19-202, Transcript of keratin 19, humanhuman

TSL 3

Gene KRT19, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT19-202ENST00000455635 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
KRT19-202ENST00000455635 CCDC180Q9P1Z9 1646 aa42.11■■■■■ 4.33
KRT19-202ENST00000455635 ABCC9O60706 1549 aa41.15■■■■■ 4.18
KRT19-202ENST00000455635 RB1CC1Q8TDY2 1594 aa39.61■■■■□ 3.93
KRT19-202ENST00000455635 NACADO15069 1562 aa39.51■■■■□ 3.92
KRT19-202ENST00000455635 MYO15BQ96JP2 1530 aa39.24■■■■□ 3.87
KRT19-202ENST00000455635 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
KRT19-202ENST00000455635 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
KRT19-202ENST00000455635 DCAF8L2P0C7V8 631 aa38.99■■■■□ 3.83
KRT19-202ENST00000455635 UNC13AQ9UPW8 1703 aa38.89■■■■□ 3.82
KRT19-202ENST00000455635 BICRAQ9NZM4 1560 aa38.47■■■■□ 3.75
KRT19-202ENST00000455635 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
KRT19-202ENST00000455635 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.72
KRT19-202ENST00000455635 SHROOM4Q9ULL8 1493 aa38.09■■■■□ 3.69
KRT19-202ENST00000455635 DNAJC5BQ9UF47 199 aa37.85■■■■□ 3.65
KRT19-202ENST00000455635 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
KRT19-202ENST00000455635 CC2D2AQ9P2K1 1620 aa37.33■■■■□ 3.57
KRT19-202ENST00000455635 CECR2Q9BXF3 1484 aa37.02■■■■□ 3.52
KRT19-202ENST00000455635 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
KRT19-202ENST00000455635 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
KRT19-202ENST00000455635 SMARCA2P51531 1590 aa36.39■■■■□ 3.42
KRT19-202ENST00000455635 NCAPD3P42695 1498 aa36.38■■■■□ 3.41
KRT19-202ENST00000455635 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
KRT19-202ENST00000455635 HMGXB3Q12766 1538 aa36.32■■■■□ 3.4
KRT19-202ENST00000455635 PEG3Q9GZU2 1588 aa36.31■■■■□ 3.4
KRT19-202ENST00000455635 MROH2BQ7Z745 1585 aa36.24■■■■□ 3.39
KRT19-202ENST00000455635 BAZ1BQ9UIG0 1483 aaKnown RBP36.07■■■■□ 3.37
KRT19-202ENST00000455635 WIZO95785 1651 aa35.88■■■■□ 3.33
KRT19-202ENST00000455635 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
KRT19-202ENST00000455635 NESP48681 1621 aa35.57■■■■□ 3.29
KRT19-202ENST00000455635 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
KRT19-202ENST00000455635 TOP2AP11388 1531 aaKnown RBP35.51■■■■□ 3.27
KRT19-202ENST00000455635 ERCC6Q03468 1493 aa35.48■■■■□ 3.27
KRT19-202ENST00000455635 KIF21AQ7Z4S6 1674 aa35.32■■■■□ 3.24
KRT19-202ENST00000455635 CUX2O14529 1486 aa35.29■■■■□ 3.24
KRT19-202ENST00000455635 THOC2Q8NI27 1593 aaKnown RBP35.27■■■■□ 3.24
KRT19-202ENST00000455635 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
KRT19-202ENST00000455635 PDS5BQ9NTI5 1447 aa35.17■■■■□ 3.22
KRT19-202ENST00000455635 CFTRP13569 1480 aa35.08■■■■□ 3.21
KRT19-202ENST00000455635 PRDM2Q13029 1718 aa35.07■■■■□ 3.2
KRT19-202ENST00000455635 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
KRT19-202ENST00000455635 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
KRT19-202ENST00000455635 CEP164Q9UPV0 1460 aa34.91■■■■□ 3.18
KRT19-202ENST00000455635 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
KRT19-202ENST00000455635 WDR62O43379 1518 aa34.89■■■■□ 3.18
KRT19-202ENST00000455635 URB2Q14146 1524 aaKnown RBP34.61■■■■□ 3.13
KRT19-202ENST00000455635 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
KRT19-202ENST00000455635 TOPBP1Q92547 1522 aa34.36■■■■□ 3.09
KRT19-202ENST00000455635 SUPT5HO00267 1087 aaKnown RBP34.36■■■■□ 3.09
KRT19-202ENST00000455635 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
KRT19-202ENST00000455635 DNAJC5Q9H3Z4 198 aa34.25■■■■□ 3.07
KRT19-202ENST00000455635 IFT140Q96RY7 1462 aa34.17■■■■□ 3.06
KRT19-202ENST00000455635 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
KRT19-202ENST00000455635 POLA1P09884 1462 aaPredicted RBP34.05■■■■□ 3.04
KRT19-202ENST00000455635 CUX1P39880 1505 aa34.04■■■■□ 3.04
KRT19-202ENST00000455635 ZNF608Q9ULD9 1512 aaPredicted RBP34.03■■■■□ 3.04
KRT19-202ENST00000455635 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
KRT19-202ENST00000455635 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
KRT19-202ENST00000455635 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
KRT19-202ENST00000455635 RAD54L2Q9Y4B4 1467 aa33.83■■■■□ 3.01
KRT19-202ENST00000455635 BIVM-ERCC5R4GMW8 1640 aa33.79■■■■□ 3
KRT19-202ENST00000455635 SOGA1O94964 1423 aa33.78■■■■□ 3
KRT19-202ENST00000455635 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.998e-8■■■■■ 39.5
KRT19-202ENST00000455635 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
KRT19-202ENST00000455635 SYNJ1O43426 1573 aa33.7■■■□□ 2.99
KRT19-202ENST00000455635 CHD1O14646 1710 aa33.67■■■□□ 2.98
KRT19-202ENST00000455635 WRNQ14191 1432 aaPredicted RBP eCLIP33.65■■■□□ 2.98
KRT19-202ENST00000455635 PBRM1Q86U86 1689 aa33.61■■■□□ 2.97
KRT19-202ENST00000455635 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
KRT19-202ENST00000455635 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
KRT19-202ENST00000455635 TDRD9Q8NDG6 1382 aaKnown RBP33.59■■■□□ 2.97
KRT19-202ENST00000455635 OSCARQ8IYS5 282 aa33.53■■■□□ 2.96
KRT19-202ENST00000455635 SNAPC4Q5SXM2 1469 aa33.51■■■□□ 2.96
KRT19-202ENST00000455635 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
KRT19-202ENST00000455635 MAGI1Q96QZ7 1491 aaPredicted RBP33.49■■■□□ 2.95
KRT19-202ENST00000455635 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
KRT19-202ENST00000455635 SYNJ2O15056 1496 aa33.33■■■□□ 2.93
KRT19-202ENST00000455635 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
KRT19-202ENST00000455635 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
KRT19-202ENST00000455635 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
KRT19-202ENST00000455635 ADAMTS12P58397 1594 aa33.29■■■□□ 2.92
KRT19-202ENST00000455635 CLASP1Q7Z460 1538 aa33.26■■■□□ 2.91
KRT19-202ENST00000455635 ARHGEF11O15085 1522 aa33.23■■■□□ 2.91
KRT19-202ENST00000455635 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
KRT19-202ENST00000455635 FBLN2P98095 1184 aa33.2■■■□□ 2.91
KRT19-202ENST00000455635 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
KRT19-202ENST00000455635 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
KRT19-202ENST00000455635 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
KRT19-202ENST00000455635 CEP170Q5SW79 1584 aa33■■■□□ 2.87
KRT19-202ENST00000455635 NUP160Q12769 1436 aa32.99■■■□□ 2.87
KRT19-202ENST00000455635 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
KRT19-202ENST00000455635 CUL7Q14999 1698 aa32.95■■■□□ 2.87
KRT19-202ENST00000455635 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
KRT19-202ENST00000455635 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
KRT19-202ENST00000455635 SHROOM2Q13796 1616 aa32.87■■■□□ 2.85
KRT19-202ENST00000455635 RUSC2Q8N2Y8 1516 aa32.82■■■□□ 2.85
KRT19-202ENST00000455635 IGF1RP08069 1367 aa32.78■■■□□ 2.84
KRT19-202ENST00000455635 ERCC6L2Q5T890 1561 aa32.72■■■□□ 2.83
KRT19-202ENST00000455635 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
KRT19-202ENST00000455635 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms