RNA–Protein interactions for RNA: ENST00000455541.1

AC016700.3-201, humanhuman

TSL 3 BASIC

Gene AC016700.3, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016700.3-201ENST00000455541 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
AC016700.3-201ENST00000455541 ABCC9O60706 1549 aa23.23■■□□□ 1.31
AC016700.3-201ENST00000455541 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
AC016700.3-201ENST00000455541 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
AC016700.3-201ENST00000455541 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
AC016700.3-201ENST00000455541 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
AC016700.3-201ENST00000455541 NACADO15069 1562 aa21.53■■□□□ 1.04
AC016700.3-201ENST00000455541 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
AC016700.3-201ENST00000455541 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
AC016700.3-201ENST00000455541 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
AC016700.3-201ENST00000455541 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
AC016700.3-201ENST00000455541 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
AC016700.3-201ENST00000455541 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
AC016700.3-201ENST00000455541 SHROOM4Q9ULL8 1493 aa20.85■□□□□ 0.93
AC016700.3-201ENST00000455541 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
AC016700.3-201ENST00000455541 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
AC016700.3-201ENST00000455541 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
AC016700.3-201ENST00000455541 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
AC016700.3-201ENST00000455541 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
AC016700.3-201ENST00000455541 CUX2O14529 1486 aa20.19■□□□□ 0.82
AC016700.3-201ENST00000455541 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
AC016700.3-201ENST00000455541 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
AC016700.3-201ENST00000455541 NESP48681 1621 aa19.82■□□□□ 0.76
AC016700.3-201ENST00000455541 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
AC016700.3-201ENST00000455541 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
AC016700.3-201ENST00000455541 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
AC016700.3-201ENST00000455541 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
AC016700.3-201ENST00000455541 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
AC016700.3-201ENST00000455541 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
AC016700.3-201ENST00000455541 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
AC016700.3-201ENST00000455541 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
AC016700.3-201ENST00000455541 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
AC016700.3-201ENST00000455541 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
AC016700.3-201ENST00000455541 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
AC016700.3-201ENST00000455541 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
AC016700.3-201ENST00000455541 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
AC016700.3-201ENST00000455541 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
AC016700.3-201ENST00000455541 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
AC016700.3-201ENST00000455541 WDR62O43379 1518 aa19.3■□□□□ 0.68
AC016700.3-201ENST00000455541 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
AC016700.3-201ENST00000455541 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
AC016700.3-201ENST00000455541 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
AC016700.3-201ENST00000455541 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
AC016700.3-201ENST00000455541 WIZO95785 1651 aa19.01■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
AC016700.3-201ENST00000455541 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
AC016700.3-201ENST00000455541 CFTRP13569 1480 aa18.97■□□□□ 0.63
AC016700.3-201ENST00000455541 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
AC016700.3-201ENST00000455541 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
AC016700.3-201ENST00000455541 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
AC016700.3-201ENST00000455541 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
AC016700.3-201ENST00000455541 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
AC016700.3-201ENST00000455541 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
AC016700.3-201ENST00000455541 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
AC016700.3-201ENST00000455541 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
AC016700.3-201ENST00000455541 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
AC016700.3-201ENST00000455541 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
AC016700.3-201ENST00000455541 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC016700.3-201ENST00000455541 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
AC016700.3-201ENST00000455541 CHD1O14646 1710 aa18.57■□□□□ 0.56
AC016700.3-201ENST00000455541 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
AC016700.3-201ENST00000455541 FBLN2P98095 1184 aa18.56■□□□□ 0.56
AC016700.3-201ENST00000455541 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
AC016700.3-201ENST00000455541 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
AC016700.3-201ENST00000455541 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
AC016700.3-201ENST00000455541 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
AC016700.3-201ENST00000455541 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
AC016700.3-201ENST00000455541 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
AC016700.3-201ENST00000455541 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
AC016700.3-201ENST00000455541 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
AC016700.3-201ENST00000455541 SOGA1O94964 1423 aa18.34■□□□□ 0.53
AC016700.3-201ENST00000455541 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
AC016700.3-201ENST00000455541 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
AC016700.3-201ENST00000455541 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
AC016700.3-201ENST00000455541 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
AC016700.3-201ENST00000455541 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
AC016700.3-201ENST00000455541 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
AC016700.3-201ENST00000455541 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
AC016700.3-201ENST00000455541 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
AC016700.3-201ENST00000455541 CUX1P39880 1505 aa18.17■□□□□ 0.5
AC016700.3-201ENST00000455541 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
AC016700.3-201ENST00000455541 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
AC016700.3-201ENST00000455541 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
AC016700.3-201ENST00000455541 NUP160Q12769 1436 aa17.98■□□□□ 0.47
AC016700.3-201ENST00000455541 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
AC016700.3-201ENST00000455541 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
AC016700.3-201ENST00000455541 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
AC016700.3-201ENST00000455541 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
AC016700.3-201ENST00000455541 ABCC10Q5T3U5 1492 aa17.85■□□□□ 0.45
AC016700.3-201ENST00000455541 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
AC016700.3-201ENST00000455541 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
AC016700.3-201ENST00000455541 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms