RNA–Protein interactions for RNA: ENST00000455470.5

SACS-204, Transcript of sacsin molecular chaperone, humanhuman

TSL 1 (best)

Gene SACS, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SACS-204ENST00000455470 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
SACS-204ENST00000455470 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
SACS-204ENST00000455470 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
SACS-204ENST00000455470 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
SACS-204ENST00000455470 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
SACS-204ENST00000455470 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
SACS-204ENST00000455470 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
SACS-204ENST00000455470 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
SACS-204ENST00000455470 HRCP23327 699 aa18.91■□□□□ 0.62
SACS-204ENST00000455470 ABCC9O60706 1549 aa18.89■□□□□ 0.61
SACS-204ENST00000455470 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
SACS-204ENST00000455470 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
SACS-204ENST00000455470 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
SACS-204ENST00000455470 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
SACS-204ENST00000455470 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
SACS-204ENST00000455470 NACADO15069 1562 aa18.47■□□□□ 0.55
SACS-204ENST00000455470 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
SACS-204ENST00000455470 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
SACS-204ENST00000455470 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
SACS-204ENST00000455470 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
SACS-204ENST00000455470 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
SACS-204ENST00000455470 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
SACS-204ENST00000455470 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
SACS-204ENST00000455470 PPARGC1BQ86YN6 1023 aaKnown RBP18.12■□□□□ 0.49
SACS-204ENST00000455470 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SACS-204ENST00000455470 WIZO95785 1651 aa18.04■□□□□ 0.48
SACS-204ENST00000455470 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
SACS-204ENST00000455470 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
SACS-204ENST00000455470 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.44
SACS-204ENST00000455470 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
SACS-204ENST00000455470 EEA1Q15075 1411 aa17.78■□□□□ 0.44
SACS-204ENST00000455470 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
SACS-204ENST00000455470 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
SACS-204ENST00000455470 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
SACS-204ENST00000455470 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
SACS-204ENST00000455470 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
SACS-204ENST00000455470 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
SACS-204ENST00000455470 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
SACS-204ENST00000455470 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
SACS-204ENST00000455470 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
SACS-204ENST00000455470 KIF21BO75037 1637 aa17.51■□□□□ 0.39
SACS-204ENST00000455470 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
SACS-204ENST00000455470 SOGA1O94964 1423 aa17.45■□□□□ 0.38
SACS-204ENST00000455470 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
SACS-204ENST00000455470 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
SACS-204ENST00000455470 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
SACS-204ENST00000455470 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
SACS-204ENST00000455470 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
SACS-204ENST00000455470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
SACS-204ENST00000455470 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
SACS-204ENST00000455470 SYNJ1O43426 1573 aa17.33■□□□□ 0.36
SACS-204ENST00000455470 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
SACS-204ENST00000455470 ACIN1Q9UKV3 1341 aaKnown RBP17.29■□□□□ 0.36
SACS-204ENST00000455470 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
SACS-204ENST00000455470 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
SACS-204ENST00000455470 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
SACS-204ENST00000455470 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
SACS-204ENST00000455470 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
SACS-204ENST00000455470 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
SACS-204ENST00000455470 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.35
SACS-204ENST00000455470 CLIP1P30622 1438 aa17.21■□□□□ 0.35
SACS-204ENST00000455470 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
SACS-204ENST00000455470 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
SACS-204ENST00000455470 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
SACS-204ENST00000455470 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
SACS-204ENST00000455470 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
SACS-204ENST00000455470 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.33
SACS-204ENST00000455470 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
SACS-204ENST00000455470 NCAPD3P42695 1498 aa17■□□□□ 0.31
SACS-204ENST00000455470 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
SACS-204ENST00000455470 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SACS-204ENST00000455470 CUX2O14529 1486 aa16.97■□□□□ 0.31
SACS-204ENST00000455470 APLP2Q06481 763 aa16.97■□□□□ 0.31
SACS-204ENST00000455470 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
SACS-204ENST00000455470 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
SACS-204ENST00000455470 MYT1Q01538 1121 aa16.94■□□□□ 0.3
SACS-204ENST00000455470 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
SACS-204ENST00000455470 CUX1P39880 1505 aa16.91■□□□□ 0.3
SACS-204ENST00000455470 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
SACS-204ENST00000455470 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
SACS-204ENST00000455470 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
SACS-204ENST00000455470 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
SACS-204ENST00000455470 CFTRP13569 1480 aa16.88■□□□□ 0.29
SACS-204ENST00000455470 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
SACS-204ENST00000455470 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
SACS-204ENST00000455470 MIER1Q8N108 512 aa16.77■□□□□ 0.28
SACS-204ENST00000455470 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.27
SACS-204ENST00000455470 TIAM1Q13009 1591 aa16.72■□□□□ 0.27
SACS-204ENST00000455470 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
SACS-204ENST00000455470 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
SACS-204ENST00000455470 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
SACS-204ENST00000455470 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
SACS-204ENST00000455470 IGF1RP08069 1367 aa16.62■□□□□ 0.25
SACS-204ENST00000455470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
SACS-204ENST00000455470 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
SACS-204ENST00000455470 EFCAB5A4FU69 1503 aa16.59■□□□□ 0.25
SACS-204ENST00000455470 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
SACS-204ENST00000455470 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
SACS-204ENST00000455470 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
SACS-204ENST00000455470 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms