RNA–Protein interactions for RNA: ENST00000455253.6

AF127936.2-201, humanhuman

TSL 5 BASIC

Gene AF127936.2, Length 1,724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF127936.2-201ENST00000455253 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
AF127936.2-201ENST00000455253 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
AF127936.2-201ENST00000455253 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
AF127936.2-201ENST00000455253 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
AF127936.2-201ENST00000455253 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
AF127936.2-201ENST00000455253 FOXD1Q16676 465 aa18.17■□□□□ 0.5
AF127936.2-201ENST00000455253 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
AF127936.2-201ENST00000455253 MSH5O43196 834 aa17.18■□□□□ 0.34
AF127936.2-201ENST00000455253 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
AF127936.2-201ENST00000455253 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
AF127936.2-201ENST00000455253 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
AF127936.2-201ENST00000455253 ADRA2BP18089 450 aa16.56■□□□□ 0.24
AF127936.2-201ENST00000455253 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
AF127936.2-201ENST00000455253 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
AF127936.2-201ENST00000455253 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
AF127936.2-201ENST00000455253 ABCC9O60706 1549 aa15.4■□□□□ 0.06
AF127936.2-201ENST00000455253 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
AF127936.2-201ENST00000455253 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
AF127936.2-201ENST00000455253 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
AF127936.2-201ENST00000455253 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
AF127936.2-201ENST00000455253 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
AF127936.2-201ENST00000455253 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
AF127936.2-201ENST00000455253 CACNB1Q02641 598 aaPredicted RBP15.02□□□□□ -0.01
AF127936.2-201ENST00000455253 NACADO15069 1562 aa15.02□□□□□ -0.01
AF127936.2-201ENST00000455253 RB1CC1Q8TDY2 1594 aa14.92□□□□□ -0.02
AF127936.2-201ENST00000455253 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
AF127936.2-201ENST00000455253 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
AF127936.2-201ENST00000455253 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
AF127936.2-201ENST00000455253 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
AF127936.2-201ENST00000455253 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
AF127936.2-201ENST00000455253 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
AF127936.2-201ENST00000455253 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
AF127936.2-201ENST00000455253 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
AF127936.2-201ENST00000455253 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
AF127936.2-201ENST00000455253 CECR2Q9BXF3 1484 aa14.43□□□□□ -0.1
AF127936.2-201ENST00000455253 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
AF127936.2-201ENST00000455253 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
AF127936.2-201ENST00000455253 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
AF127936.2-201ENST00000455253 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
AF127936.2-201ENST00000455253 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
AF127936.2-201ENST00000455253 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
AF127936.2-201ENST00000455253 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
AF127936.2-201ENST00000455253 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
AF127936.2-201ENST00000455253 WIZO95785 1651 aa14.18□□□□□ -0.14
AF127936.2-201ENST00000455253 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
AF127936.2-201ENST00000455253 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.17
AF127936.2-201ENST00000455253 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
AF127936.2-201ENST00000455253 TOP2AP11388 1531 aaKnown RBP13.98□□□□□ -0.17
AF127936.2-201ENST00000455253 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
AF127936.2-201ENST00000455253 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
AF127936.2-201ENST00000455253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
AF127936.2-201ENST00000455253 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
AF127936.2-201ENST00000455253 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
AF127936.2-201ENST00000455253 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
AF127936.2-201ENST00000455253 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
AF127936.2-201ENST00000455253 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
AF127936.2-201ENST00000455253 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
AF127936.2-201ENST00000455253 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
AF127936.2-201ENST00000455253 POTEHQ6S545 545 aa13.64□□□□□ -0.23
AF127936.2-201ENST00000455253 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
AF127936.2-201ENST00000455253 CFTRP13569 1480 aa13.58□□□□□ -0.24
AF127936.2-201ENST00000455253 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
AF127936.2-201ENST00000455253 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
AF127936.2-201ENST00000455253 DSG3P32926 999 aa13.53□□□□□ -0.24
AF127936.2-201ENST00000455253 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
AF127936.2-201ENST00000455253 CAPN15O75808 1086 aa13.51□□□□□ -0.25
AF127936.2-201ENST00000455253 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
AF127936.2-201ENST00000455253 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
AF127936.2-201ENST00000455253 NESP48681 1621 aa13.5□□□□□ -0.25
AF127936.2-201ENST00000455253 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
AF127936.2-201ENST00000455253 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
AF127936.2-201ENST00000455253 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
AF127936.2-201ENST00000455253 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
AF127936.2-201ENST00000455253 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
AF127936.2-201ENST00000455253 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
AF127936.2-201ENST00000455253 SOGA1O94964 1423 aa13.37□□□□□ -0.27
AF127936.2-201ENST00000455253 CUX1P39880 1505 aa13.37□□□□□ -0.27
AF127936.2-201ENST00000455253 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
AF127936.2-201ENST00000455253 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
AF127936.2-201ENST00000455253 RUSC2Q8N2Y8 1516 aa13.33□□□□□ -0.28
AF127936.2-201ENST00000455253 BIVM-ERCC5R4GMW8 1640 aa13.32□□□□□ -0.28
AF127936.2-201ENST00000455253 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
AF127936.2-201ENST00000455253 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
AF127936.2-201ENST00000455253 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
AF127936.2-201ENST00000455253 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
AF127936.2-201ENST00000455253 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
AF127936.2-201ENST00000455253 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
AF127936.2-201ENST00000455253 EEA1Q15075 1411 aa13.23□□□□□ -0.29
AF127936.2-201ENST00000455253 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
AF127936.2-201ENST00000455253 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
AF127936.2-201ENST00000455253 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
AF127936.2-201ENST00000455253 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
AF127936.2-201ENST00000455253 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
AF127936.2-201ENST00000455253 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
AF127936.2-201ENST00000455253 ABCB7O75027 752 aa13.16□□□□□ -0.3
AF127936.2-201ENST00000455253 APLP2Q06481 763 aa13.16□□□□□ -0.3
AF127936.2-201ENST00000455253 CUX2O14529 1486 aa13.16□□□□□ -0.3
AF127936.2-201ENST00000455253 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
AF127936.2-201ENST00000455253 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
AF127936.2-201ENST00000455253 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms