RNA–Protein interactions for RNA: ENST00000455235.5

ZDHHC3-208, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 4

Gene ZDHHC3, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-208ENST00000455235 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.35■■■□□ 2.134e-12■■■■■ 68.5
ZDHHC3-208ENST00000455235 DDX3XO00571 662 aaKnown RBP eCLIP25■■□□□ 1.596e-10■■■■■ 34.4
ZDHHC3-208ENST00000455235 YBX3P16989 372 aaKnown RBP eCLIP31.44■■■□□ 2.621e-9■■□□□ 13.3
ZDHHC3-208ENST00000455235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.58■□□□□ 0.893e-9■■■■■ 32.2
ZDHHC3-208ENST00000455235 METAP2P50579 478 aaKnown RBP eCLIP27.94■■■□□ 2.066e-9■■■■■ 37
ZDHHC3-208ENST00000455235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.76■■□□□ 1.718e-8■■■■■ 129
ZDHHC3-208ENST00000455235 SF3B1O75533 1304 aaKnown RBP eCLIP26.38■■□□□ 1.813e-7■■■■■ 66.5
ZDHHC3-208ENST00000455235 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.45■■□□□ 1.188e-7■■■■□ 24.7
ZDHHC3-208ENST00000455235 EIF4G2P78344 907 aaKnown RBP eCLIP33.87■■■■□ 3.012e-6■■□□□ 12.5
ZDHHC3-208ENST00000455235 SF3B4Q15427 424 aaKnown RBP eCLIP21.9■■□□□ 1.19e-6■■□□□ 14.4
Retrieved 10 of 10 RNA–protein pairs in 4.3 ms