RNA–Protein interactions for RNA: ENST00000455022.1

UTRN-209, Transcript of utrophin, humanhuman

TSL 3

Gene UTRN, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTRN-209ENST00000455022 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
UTRN-209ENST00000455022 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
UTRN-209ENST00000455022 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
UTRN-209ENST00000455022 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
UTRN-209ENST00000455022 FOXD1Q16676 465 aa18.31■□□□□ 0.52
UTRN-209ENST00000455022 MSH5O43196 834 aa17.2■□□□□ 0.34
UTRN-209ENST00000455022 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
UTRN-209ENST00000455022 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
UTRN-209ENST00000455022 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
UTRN-209ENST00000455022 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
UTRN-209ENST00000455022 ADRA2BP18089 450 aa16.89■□□□□ 0.29
UTRN-209ENST00000455022 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
UTRN-209ENST00000455022 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
UTRN-209ENST00000455022 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
UTRN-209ENST00000455022 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
UTRN-209ENST00000455022 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
UTRN-209ENST00000455022 DCAF8L1A6NGE4 600 aa14.9□□□□□ -0.02
UTRN-209ENST00000455022 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
UTRN-209ENST00000455022 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
UTRN-209ENST00000455022 RNF216Q9NWF9 866 aaPredicted RBP14.68□□□□□ -0.06
UTRN-209ENST00000455022 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
UTRN-209ENST00000455022 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
UTRN-209ENST00000455022 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
UTRN-209ENST00000455022 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
UTRN-209ENST00000455022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
UTRN-209ENST00000455022 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
UTRN-209ENST00000455022 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
UTRN-209ENST00000455022 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
UTRN-209ENST00000455022 CAPN15O75808 1086 aa13.69□□□□□ -0.22
UTRN-209ENST00000455022 KCNA4P22459 653 aa13.67□□□□□ -0.22
UTRN-209ENST00000455022 DSG3P32926 999 aa13.66□□□□□ -0.22
UTRN-209ENST00000455022 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
UTRN-209ENST00000455022 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
UTRN-209ENST00000455022 POTEHQ6S545 545 aa13.42□□□□□ -0.26
UTRN-209ENST00000455022 APLP2Q06481 763 aa13.39□□□□□ -0.27
UTRN-209ENST00000455022 ABCB7O75027 752 aa13.37□□□□□ -0.27
UTRN-209ENST00000455022 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
UTRN-209ENST00000455022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
UTRN-209ENST00000455022 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
UTRN-209ENST00000455022 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
UTRN-209ENST00000455022 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
UTRN-209ENST00000455022 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
UTRN-209ENST00000455022 POLA2Q14181 598 aa13.01□□□□□ -0.33
UTRN-209ENST00000455022 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
UTRN-209ENST00000455022 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
UTRN-209ENST00000455022 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
UTRN-209ENST00000455022 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
UTRN-209ENST00000455022 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
UTRN-209ENST00000455022 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
UTRN-209ENST00000455022 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
UTRN-209ENST00000455022 ABCC9O60706 1549 aa12.67□□□□□ -0.38
UTRN-209ENST00000455022 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
UTRN-209ENST00000455022 ZBTB22O15209 634 aa12.58□□□□□ -0.4
UTRN-209ENST00000455022 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
UTRN-209ENST00000455022 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
UTRN-209ENST00000455022 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
UTRN-209ENST00000455022 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
UTRN-209ENST00000455022 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
UTRN-209ENST00000455022 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.432e-10■■■■□ 22.3
UTRN-209ENST00000455022 HAX1O00165 279 aa12.34□□□□□ -0.43
UTRN-209ENST00000455022 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
UTRN-209ENST00000455022 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
UTRN-209ENST00000455022 FBLN2P98095 1184 aa12.3□□□□□ -0.44
UTRN-209ENST00000455022 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
UTRN-209ENST00000455022 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
UTRN-209ENST00000455022 EVX2Q03828 476 aa12.18□□□□□ -0.46
UTRN-209ENST00000455022 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
UTRN-209ENST00000455022 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
UTRN-209ENST00000455022 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
UTRN-209ENST00000455022 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
UTRN-209ENST00000455022 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
UTRN-209ENST00000455022 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
UTRN-209ENST00000455022 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
UTRN-209ENST00000455022 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
UTRN-209ENST00000455022 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
UTRN-209ENST00000455022 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
UTRN-209ENST00000455022 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
UTRN-209ENST00000455022 GABBR2O75899 941 aa11.89□□□□□ -0.51
UTRN-209ENST00000455022 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
UTRN-209ENST00000455022 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
UTRN-209ENST00000455022 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
UTRN-209ENST00000455022 LHX8Q68G74 356 aa11.71□□□□□ -0.53
UTRN-209ENST00000455022 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
UTRN-209ENST00000455022 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
UTRN-209ENST00000455022 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
UTRN-209ENST00000455022 CLCN6P51797 869 aa11.58□□□□□ -0.56
UTRN-209ENST00000455022 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
UTRN-209ENST00000455022 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
UTRN-209ENST00000455022 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
UTRN-209ENST00000455022 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
UTRN-209ENST00000455022 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
UTRN-209ENST00000455022 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
UTRN-209ENST00000455022 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
UTRN-209ENST00000455022 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
UTRN-209ENST00000455022 CECR2Q9BXF3 1484 aa11.45□□□□□ -0.58
UTRN-209ENST00000455022 CC2D2AQ9P2K1 1620 aa11.43□□□□□ -0.58
UTRN-209ENST00000455022 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
UTRN-209ENST00000455022 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
UTRN-209ENST00000455022 NACADO15069 1562 aa11.36□□□□□ -0.59
UTRN-209ENST00000455022 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms