RNA–Protein interactions for RNA: ENST00000454619.5

NME4-208, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 5

Gene NME4, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-208ENST00000454619 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.558e-31■■■■□ 24.5
NME4-208ENST00000454619 SAFB2Q14151 953 aaKnown RBP eCLIP21.17■□□□□ 0.984e-27■■■■■ 42.2
NME4-208ENST00000454619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.93■□□□□ 0.142e-18■■■■■ 201.2
NME4-208ENST00000454619 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.792e-18■□□□□ 8.8
NME4-208ENST00000454619 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.224e-18■■■■■ 190.7
NME4-208ENST00000454619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.237e-17■■■■■ 69.3
NME4-208ENST00000454619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.393e-13■■■■□ 26.1
NME4-208ENST00000454619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.04■□□□□ 0.481e-12■■■■■ 39
NME4-208ENST00000454619 NOLC1Q14978 699 aaKnown RBP eCLIP15.57■□□□□ 0.083e-12■□□□□ 10.9
NME4-208ENST00000454619 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.684e-12■□□□□ 10
NME4-208ENST00000454619 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.281e-11■■■■■ 53.6
NME4-208ENST00000454619 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.271e-11■■□□□ 11.9
NME4-208ENST00000454619 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.161e-11■■■■■ 41.1
NME4-208ENST00000454619 PRPF4O43172 522 aaKnown RBP eCLIP13.6□□□□□ -0.237e-11■■■■■ 36.5
NME4-208ENST00000454619 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.629e-11■■■■■ 80.7
NME4-208ENST00000454619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.242e-10■■■■■ 37.2
NME4-208ENST00000454619 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.292e-10■□□□□ 8.5
NME4-208ENST00000454619 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.61■□□□□ 0.252e-9■■■■■ 31
NME4-208ENST00000454619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.54□□□□□ -0.083e-9■■■■■ 75.1
NME4-208ENST00000454619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.013e-9■■■■■ 101.7
NME4-208ENST00000454619 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.733e-9■■■□□ 16.7
NME4-208ENST00000454619 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.93■□□□□ 0.145e-9■■■■■ 64.5
NME4-208ENST00000454619 SF3B1O75533 1304 aaKnown RBP eCLIP15.86■□□□□ 0.135e-9■■■■■ 129.7
NME4-208ENST00000454619 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.338e-9■■□□□ 12.7
NME4-208ENST00000454619 PUM1Q14671 1186 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■□□□□ 11.3
NME4-208ENST00000454619 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.251e-8■□□□□ 10.9
NME4-208ENST00000454619 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.72e-8■■■■□ 26.5
NME4-208ENST00000454619 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.422e-8■■■■□ 19.4
NME4-208ENST00000454619 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.832e-8■■■■■ 32.9
NME4-208ENST00000454619 NCBP2P52298 156 aaKnown RBP eCLIP12.75□□□□□ -0.373e-8■■■□□ 18.4
NME4-208ENST00000454619 PCBP2Q15366 365 aaKnown RBP eCLIP13.11□□□□□ -0.313e-8■■■■■ 34.9
NME4-208ENST00000454619 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.373e-8■■□□□ 13.2
NME4-208ENST00000454619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.333e-8■■■■■ 32.6
NME4-208ENST00000454619 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.165e-8■□□□□ 8.7
NME4-208ENST00000454619 NONOQ15233 471 aaKnown RBP eCLIP16■□□□□ 0.155e-8■■■■□ 23.5
NME4-208ENST00000454619 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.335e-8■□□□□ 9.6
NME4-208ENST00000454619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.066e-8■■■□□ 17.5
NME4-208ENST00000454619 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.211e-7■□□□□ 11.2
NME4-208ENST00000454619 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.341e-7■■■□□ 15.9
NME4-208ENST00000454619 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.43□□□□□ -0.582e-7■■■■■ 41.8
NME4-208ENST00000454619 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■□□ 15.1
NME4-208ENST00000454619 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■■□□ 17.8
NME4-208ENST00000454619 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.25□□□□□ -0.453e-7■■■■□ 24.4
NME4-208ENST00000454619 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.9□□□□□ -0.024e-7■■□□□ 11.5
NME4-208ENST00000454619 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.355e-7■■■■□ 25.3
NME4-208ENST00000454619 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.67■□□□□ 0.427e-7■■■■□ 20.6
NME4-208ENST00000454619 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.19■□□□□ 0.347e-7■■■□□ 16.6
NME4-208ENST00000454619 DDX6P26196 483 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■■■ 27.3
NME4-208ENST00000454619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.431e-6■■■□□ 18.6
NME4-208ENST00000454619 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■■□□ 18.9
NME4-208ENST00000454619 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■□□□□ 11.1
NME4-208ENST00000454619 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.11□□□□□ -0.152e-6■■□□□ 11.8
NME4-208ENST00000454619 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.722e-6■■■□□ 15
NME4-208ENST00000454619 SRSF1Q07955 248 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■□□□□ 9.3
NME4-208ENST00000454619 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■■■■□ 20.1
NME4-208ENST00000454619 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.164e-6■■■■□ 23.1
NME4-208ENST00000454619 SF3B4Q15427 424 aaKnown RBP eCLIP13.13□□□□□ -0.318e-6■■□□□ 11.6
Retrieved 57 of 57 RNA–protein pairs in 12.4 ms