RNA–Protein interactions for RNA: ENST00000454607.5

AL109827.1-201, humanhuman

APPRIS ALT2 TSL 2

Gene AL109827.1, Length 679 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109827.1-201ENST00000454607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.09□□□□□ -0.478e-8■■■■■ 110.3
AL109827.1-201ENST00000454607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.54□□□□□ -0.883e-13■■■■■ 108.9
AL109827.1-201ENST00000454607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.689e-7■■■■■ 87.2
AL109827.1-201ENST00000454607 SF3B1O75533 1304 aaKnown RBP eCLIP10.88□□□□□ -0.676e-7■■■■■ 71.8
AL109827.1-201ENST00000454607 CSTF2P33240 577 aaKnown RBP eCLIP9.77□□□□□ -0.852e-45■■■■■ 66.1
AL109827.1-201ENST00000454607 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■■■■■ 55.4
AL109827.1-201ENST00000454607 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■■■■■ 44
AL109827.1-201ENST00000454607 EFTUD2Q15029 972 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■■■■■ 37.1
AL109827.1-201ENST00000454607 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.27□□□□□ -0.935e-8■■■■■ 31.8
AL109827.1-201ENST00000454607 RBFOX2O43251 390 aaKnown RBP eCLIP7.8□□□□□ -1.163e-14■■■■■ 31.7
AL109827.1-201ENST00000454607 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■■■■ 26.8
AL109827.1-201ENST00000454607 SF3B4Q15427 424 aaKnown RBP eCLIP9.05□□□□□ -0.963e-6■■■■□ 26.1
AL109827.1-201ENST00000454607 HNRNPMP52272 730 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■■■■□ 25.4
AL109827.1-201ENST00000454607 DDX6P26196 483 aaKnown RBP eCLIP10.57□□□□□ -0.729e-13■■■■□ 25.3
AL109827.1-201ENST00000454607 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.131e-7■■■■□ 24.8
AL109827.1-201ENST00000454607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■■■□ 24.6
AL109827.1-201ENST00000454607 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.619e-7■■■■□ 22.3
AL109827.1-201ENST00000454607 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.367e-7■■■■□ 21.9
AL109827.1-201ENST00000454607 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■□ 21.8
AL109827.1-201ENST00000454607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.38□□□□□ -0.915e-12■■■■□ 21.5
AL109827.1-201ENST00000454607 SAFBQ15424 915 aaKnown RBP eCLIP11.38□□□□□ -0.591e-17■■■■□ 20.2
AL109827.1-201ENST00000454607 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.437e-7■■■□□ 18.6
AL109827.1-201ENST00000454607 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■■■□□ 18.4
AL109827.1-201ENST00000454607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.092e-8■■■□□ 18.3
AL109827.1-201ENST00000454607 HNRNPCP07910 306 aaKnown RBP eCLIP7.51□□□□□ -1.218e-7■■■□□ 18.2
AL109827.1-201ENST00000454607 RPS3P23396 243 aaKnown RBP eCLIP9.75□□□□□ -0.856e-8■■■□□ 18.1
AL109827.1-201ENST00000454607 BCCIPQ9P287 314 aaKnown RBP eCLIP10.36□□□□□ -0.755e-7■■■□□ 17.8
AL109827.1-201ENST00000454607 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.78e-8■■■□□ 15.7
AL109827.1-201ENST00000454607 DDX3XO00571 662 aaKnown RBP eCLIP10.39□□□□□ -0.751e-13■■■□□ 15.3
AL109827.1-201ENST00000454607 QKIQ96PU8 341 aaKnown RBP eCLIP10.07□□□□□ -0.86e-7■■■□□ 15.2
AL109827.1-201ENST00000454607 RBM15Q96T37 977 aaKnown RBP eCLIP10.09□□□□□ -0.796e-9■■■□□ 15.1
AL109827.1-201ENST00000454607 HLTFQ14527 1009 aaKnown RBP eCLIP9.86□□□□□ -0.835e-8■■□□□ 14.2
AL109827.1-201ENST00000454607 RBM22Q9NW64 420 aaKnown RBP eCLIP10.14□□□□□ -0.798e-16■■□□□ 14.2
AL109827.1-201ENST00000454607 EIF3HO15372 352 aaKnown RBP eCLIP9.72□□□□□ -0.857e-7■■□□□ 14.2
AL109827.1-201ENST00000454607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.15■□□□□ 0.027e-10■■□□□ 13.2
AL109827.1-201ENST00000454607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.121e-38■■□□□ 13.2
AL109827.1-201ENST00000454607 ZRANB2O95218 330 aaKnown RBP eCLIP10.16□□□□□ -0.781e-6■■□□□ 12.9
AL109827.1-201ENST00000454607 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■□□□ 12.5
AL109827.1-201ENST00000454607 ILF3Q12906 894 aaKnown RBP eCLIP9.93□□□□□ -0.823e-7■■□□□ 12.3
AL109827.1-201ENST00000454607 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.331e-10■■□□□ 12.2
AL109827.1-201ENST00000454607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.621e-8■■□□□ 11.7
AL109827.1-201ENST00000454607 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.4□□□□□ -0.742e-10■□□□□ 11.3
AL109827.1-201ENST00000454607 SFPQP23246 707 aaKnown RBP eCLIP11.11□□□□□ -0.638e-7■□□□□ 11.1
AL109827.1-201ENST00000454607 SF3A3Q12874 501 aaKnown RBP eCLIP9.23□□□□□ -0.935e-8■□□□□ 11
AL109827.1-201ENST00000454607 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.3□□□□□ -0.929e-7■□□□□ 11
AL109827.1-201ENST00000454607 PCBP2Q15366 365 aaKnown RBP eCLIP9.49□□□□□ -0.893e-16■□□□□ 10.9
AL109827.1-201ENST00000454607 GRSF1Q12849 480 aaKnown RBP eCLIP10.46□□□□□ -0.733e-10■□□□□ 10.9
AL109827.1-201ENST00000454607 PRPF4O43172 522 aaKnown RBP eCLIP9.51□□□□□ -0.893e-8■□□□□ 10.6
AL109827.1-201ENST00000454607 NIPBLQ6KC79 2804 aaeCLIP8.29□□□□□ -1.081e-8■□□□□ 10.5
AL109827.1-201ENST00000454607 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.64□□□□□ -0.556e-9■□□□□ 10.4
AL109827.1-201ENST00000454607 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.662e-12■□□□□ 10
AL109827.1-201ENST00000454607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.263e-6■□□□□ 10
AL109827.1-201ENST00000454607 U2AF2P26368 475 aaKnown RBP eCLIP11.27□□□□□ -0.613e-26■□□□□ 9.9
AL109827.1-201ENST00000454607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.746e-6■□□□□ 9.8
AL109827.1-201ENST00000454607 NCBP2P52298 156 aaKnown RBP eCLIP9.29□□□□□ -0.929e-8■□□□□ 9.8
AL109827.1-201ENST00000454607 SRSF7Q16629 238 aaKnown RBP eCLIP7.97□□□□□ -1.131e-7■□□□□ 9.8
AL109827.1-201ENST00000454607 TAF15Q92804 592 aaKnown RBP eCLIP8.19□□□□□ -1.11e-6■□□□□ 9.7
AL109827.1-201ENST00000454607 FTOQ9C0B1 505 aaKnown RBP eCLIP11.3□□□□□ -0.65e-10■□□□□ 9.7
AL109827.1-201ENST00000454607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.563e-8■□□□□ 9.3
AL109827.1-201ENST00000454607 G3BP1Q13283 466 aaKnown RBP eCLIP12.44□□□□□ -0.425e-8■□□□□ 9.2
AL109827.1-201ENST00000454607 SAFB2Q14151 953 aaKnown RBP eCLIP14.43□□□□□ -0.13e-13■□□□□ 9.1
AL109827.1-201ENST00000454607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.032e-14■□□□□ 8.9
AL109827.1-201ENST00000454607 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.262e-6■□□□□ 8.5
AL109827.1-201ENST00000454607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.01□□□□□ -0.812e-10■□□□□ 8.4
AL109827.1-201ENST00000454607 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.642e-19■□□□□ 8.2
AL109827.1-201ENST00000454607 NOLC1Q14978 699 aaKnown RBP eCLIP10.96□□□□□ -0.653e-8■□□□□ 8.2
Retrieved 66 of 66 RNA–protein pairs in 14.4 ms