RNA–Protein interactions for RNA: ENST00000454366.1

GTSE1-201, Transcript of G2 and S-phase expressed 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTSE1, Length 3,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTSE1-201ENST00000454366 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
GTSE1-201ENST00000454366 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
GTSE1-201ENST00000454366 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
GTSE1-201ENST00000454366 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
GTSE1-201ENST00000454366 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
GTSE1-201ENST00000454366 ABCC9O60706 1549 aa19.36■□□□□ 0.69
GTSE1-201ENST00000454366 NACADO15069 1562 aa19.27■□□□□ 0.68
GTSE1-201ENST00000454366 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
GTSE1-201ENST00000454366 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
GTSE1-201ENST00000454366 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
GTSE1-201ENST00000454366 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
GTSE1-201ENST00000454366 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
GTSE1-201ENST00000454366 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
GTSE1-201ENST00000454366 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.55
GTSE1-201ENST00000454366 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
GTSE1-201ENST00000454366 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
GTSE1-201ENST00000454366 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
GTSE1-201ENST00000454366 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
GTSE1-201ENST00000454366 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
GTSE1-201ENST00000454366 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
GTSE1-201ENST00000454366 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
GTSE1-201ENST00000454366 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
GTSE1-201ENST00000454366 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
GTSE1-201ENST00000454366 WIZO95785 1651 aa18.21■□□□□ 0.51
GTSE1-201ENST00000454366 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
GTSE1-201ENST00000454366 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
GTSE1-201ENST00000454366 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
GTSE1-201ENST00000454366 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
GTSE1-201ENST00000454366 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
GTSE1-201ENST00000454366 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
GTSE1-201ENST00000454366 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
GTSE1-201ENST00000454366 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
GTSE1-201ENST00000454366 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
GTSE1-201ENST00000454366 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
GTSE1-201ENST00000454366 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
GTSE1-201ENST00000454366 MYT1Q01538 1121 aa17.65■□□□□ 0.42
GTSE1-201ENST00000454366 EEA1Q15075 1411 aa17.53■□□□□ 0.4
GTSE1-201ENST00000454366 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
GTSE1-201ENST00000454366 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
GTSE1-201ENST00000454366 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
GTSE1-201ENST00000454366 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
GTSE1-201ENST00000454366 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
GTSE1-201ENST00000454366 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
GTSE1-201ENST00000454366 CFTRP13569 1480 aa17.36■□□□□ 0.37
GTSE1-201ENST00000454366 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
GTSE1-201ENST00000454366 KIF21BO75037 1637 aa17.35■□□□□ 0.37
GTSE1-201ENST00000454366 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
GTSE1-201ENST00000454366 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
GTSE1-201ENST00000454366 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
GTSE1-201ENST00000454366 CUX1P39880 1505 aa17.15■□□□□ 0.34
GTSE1-201ENST00000454366 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
GTSE1-201ENST00000454366 SOGA1O94964 1423 aa17.14■□□□□ 0.33
GTSE1-201ENST00000454366 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
GTSE1-201ENST00000454366 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
GTSE1-201ENST00000454366 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
GTSE1-201ENST00000454366 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
GTSE1-201ENST00000454366 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
GTSE1-201ENST00000454366 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
GTSE1-201ENST00000454366 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
GTSE1-201ENST00000454366 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
GTSE1-201ENST00000454366 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
GTSE1-201ENST00000454366 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
GTSE1-201ENST00000454366 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
GTSE1-201ENST00000454366 HRCP23327 699 aa16.92■□□□□ 0.3
GTSE1-201ENST00000454366 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
GTSE1-201ENST00000454366 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
GTSE1-201ENST00000454366 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
GTSE1-201ENST00000454366 CUL7Q14999 1698 aa16.85■□□□□ 0.29
GTSE1-201ENST00000454366 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
GTSE1-201ENST00000454366 FAM9AQ8IZU1 332 aaPredicted RBP16.83■□□□□ 0.29
GTSE1-201ENST00000454366 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
GTSE1-201ENST00000454366 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
GTSE1-201ENST00000454366 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
GTSE1-201ENST00000454366 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
GTSE1-201ENST00000454366 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
GTSE1-201ENST00000454366 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
GTSE1-201ENST00000454366 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
GTSE1-201ENST00000454366 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.28
GTSE1-201ENST00000454366 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
GTSE1-201ENST00000454366 NESP48681 1621 aa16.75■□□□□ 0.27
GTSE1-201ENST00000454366 CLIP1P30622 1438 aa16.74■□□□□ 0.27
GTSE1-201ENST00000454366 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
GTSE1-201ENST00000454366 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
GTSE1-201ENST00000454366 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
GTSE1-201ENST00000454366 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
GTSE1-201ENST00000454366 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
GTSE1-201ENST00000454366 MAP3K1Q13233 1512 aa16.71■□□□□ 0.27
GTSE1-201ENST00000454366 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
GTSE1-201ENST00000454366 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
GTSE1-201ENST00000454366 CUX2O14529 1486 aa16.69■□□□□ 0.26
GTSE1-201ENST00000454366 IGF1RP08069 1367 aa16.69■□□□□ 0.26
GTSE1-201ENST00000454366 ARAP1Q96P48 1450 aa16.69■□□□□ 0.26
GTSE1-201ENST00000454366 EFCAB5A4FU69 1503 aa16.64■□□□□ 0.25
GTSE1-201ENST00000454366 WDR62O43379 1518 aa16.61■□□□□ 0.25
GTSE1-201ENST00000454366 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
GTSE1-201ENST00000454366 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
GTSE1-201ENST00000454366 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.25
GTSE1-201ENST00000454366 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.25
GTSE1-201ENST00000454366 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
GTSE1-201ENST00000454366 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 439.5 ms