RNA–Protein interactions for RNA: ENST00000453676.5

SMYD3-205, Transcript of SET and MYND domain containing 3, humanhuman

TSL 4

Gene SMYD3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-205ENST00000453676 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
SMYD3-205ENST00000453676 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
SMYD3-205ENST00000453676 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
SMYD3-205ENST00000453676 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
SMYD3-205ENST00000453676 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
SMYD3-205ENST00000453676 FOXD1Q16676 465 aa12.71□□□□□ -0.37
SMYD3-205ENST00000453676 ADRA2BP18089 450 aa12.64□□□□□ -0.39
SMYD3-205ENST00000453676 PPP6R1Q9UPN7 881 aa12.57□□□□□ -0.4
SMYD3-205ENST00000453676 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
SMYD3-205ENST00000453676 KCNA4P22459 653 aa12.11□□□□□ -0.47
SMYD3-205ENST00000453676 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
SMYD3-205ENST00000453676 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
SMYD3-205ENST00000453676 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
SMYD3-205ENST00000453676 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
SMYD3-205ENST00000453676 MSH5O43196 834 aa11.55□□□□□ -0.56
SMYD3-205ENST00000453676 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
SMYD3-205ENST00000453676 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
SMYD3-205ENST00000453676 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
SMYD3-205ENST00000453676 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
SMYD3-205ENST00000453676 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
SMYD3-205ENST00000453676 ZBTB22O15209 634 aa11.11□□□□□ -0.63
SMYD3-205ENST00000453676 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
SMYD3-205ENST00000453676 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
SMYD3-205ENST00000453676 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
SMYD3-205ENST00000453676 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
SMYD3-205ENST00000453676 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
SMYD3-205ENST00000453676 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
SMYD3-205ENST00000453676 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
SMYD3-205ENST00000453676 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
SMYD3-205ENST00000453676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.726e-8■■□□□ 13.5
SMYD3-205ENST00000453676 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
SMYD3-205ENST00000453676 FKBP8Q14318 412 aa10.37□□□□□ -0.75
SMYD3-205ENST00000453676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
SMYD3-205ENST00000453676 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
SMYD3-205ENST00000453676 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
SMYD3-205ENST00000453676 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
SMYD3-205ENST00000453676 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
SMYD3-205ENST00000453676 APLP2Q06481 763 aa10.17□□□□□ -0.78
SMYD3-205ENST00000453676 ZNF219Q9P2Y4 722 aaPredicted RBP10.15□□□□□ -0.78
SMYD3-205ENST00000453676 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
SMYD3-205ENST00000453676 AMER1Q5JTC6 1135 aaPredicted RBP10.11□□□□□ -0.79
SMYD3-205ENST00000453676 TRHP20396 242 aaPredicted RBP10.06□□□□□ -0.8
SMYD3-205ENST00000453676 CAPN15O75808 1086 aa10□□□□□ -0.81
SMYD3-205ENST00000453676 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
SMYD3-205ENST00000453676 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
SMYD3-205ENST00000453676 FBLN2P98095 1184 aa9.93□□□□□ -0.82
SMYD3-205ENST00000453676 POLA2Q14181 598 aa9.93□□□□□ -0.82
SMYD3-205ENST00000453676 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
SMYD3-205ENST00000453676 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
SMYD3-205ENST00000453676 ABCB7O75027 752 aa9.85□□□□□ -0.83
SMYD3-205ENST00000453676 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
SMYD3-205ENST00000453676 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
SMYD3-205ENST00000453676 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
SMYD3-205ENST00000453676 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
SMYD3-205ENST00000453676 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
SMYD3-205ENST00000453676 VASPP50552 380 aaPredicted RBP9.68□□□□□ -0.86
SMYD3-205ENST00000453676 PROM2Q8N271 834 aa9.64□□□□□ -0.87
SMYD3-205ENST00000453676 DCAF8L2P0C7V8 631 aa9.61□□□□□ -0.87
SMYD3-205ENST00000453676 ZNF692Q9BU19 519 aaPredicted RBP9.61□□□□□ -0.87
SMYD3-205ENST00000453676 DSG3P32926 999 aa9.6□□□□□ -0.87
SMYD3-205ENST00000453676 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
SMYD3-205ENST00000453676 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
SMYD3-205ENST00000453676 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
SMYD3-205ENST00000453676 CACNB1Q02641 598 aaPredicted RBP9.5□□□□□ -0.89
SMYD3-205ENST00000453676 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
SMYD3-205ENST00000453676 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
SMYD3-205ENST00000453676 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
SMYD3-205ENST00000453676 PABPN1Q86U42 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMYD3-205ENST00000453676 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
SMYD3-205ENST00000453676 MIER1Q8N108 512 aa9.44□□□□□ -0.9
SMYD3-205ENST00000453676 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
SMYD3-205ENST00000453676 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
SMYD3-205ENST00000453676 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
SMYD3-205ENST00000453676 PKD2Q13563 968 aa9.39□□□□□ -0.91
SMYD3-205ENST00000453676 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
SMYD3-205ENST00000453676 PLEKHG5O94827 1062 aa9.36□□□□□ -0.91
SMYD3-205ENST00000453676 HAP1P54257 671 aaPredicted RBP9.34□□□□□ -0.91
SMYD3-205ENST00000453676 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
SMYD3-205ENST00000453676 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
SMYD3-205ENST00000453676 ZBTB47Q9UFB7 747 aaPredicted RBP9.25□□□□□ -0.93
SMYD3-205ENST00000453676 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
SMYD3-205ENST00000453676 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
SMYD3-205ENST00000453676 RGL2O15211 777 aa9.21□□□□□ -0.94
SMYD3-205ENST00000453676 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
SMYD3-205ENST00000453676 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
SMYD3-205ENST00000453676 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
SMYD3-205ENST00000453676 NPM1P06748 294 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMYD3-205ENST00000453676 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
SMYD3-205ENST00000453676 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
SMYD3-205ENST00000453676 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
SMYD3-205ENST00000453676 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
SMYD3-205ENST00000453676 DCAF8Q5TAQ9 597 aa9.12□□□□□ -0.95
SMYD3-205ENST00000453676 AKT1S1Q96B36 256 aa9.12□□□□□ -0.95
SMYD3-205ENST00000453676 GSE1Q14687 1217 aa9.08□□□□□ -0.96
SMYD3-205ENST00000453676 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
SMYD3-205ENST00000453676 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
SMYD3-205ENST00000453676 REM2Q8IYK8 340 aaPredicted RBP9.06□□□□□ -0.96
SMYD3-205ENST00000453676 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
SMYD3-205ENST00000453676 NUBP1P53384 320 aa9.02□□□□□ -0.97
SMYD3-205ENST00000453676 FAM212AQ96EL1 285 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms