RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
LINC00963-206ENST00000453213 ABCC9O60706 1549 aa20.61■□□□□ 0.89
LINC00963-206ENST00000453213 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
LINC00963-206ENST00000453213 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
LINC00963-206ENST00000453213 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
LINC00963-206ENST00000453213 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
LINC00963-206ENST00000453213 NACADO15069 1562 aa19.05■□□□□ 0.64
LINC00963-206ENST00000453213 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
LINC00963-206ENST00000453213 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.6
LINC00963-206ENST00000453213 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
LINC00963-206ENST00000453213 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
LINC00963-206ENST00000453213 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
LINC00963-206ENST00000453213 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
LINC00963-206ENST00000453213 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
LINC00963-206ENST00000453213 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
LINC00963-206ENST00000453213 EIF4G1Q04637 1599 aaKnown RBP18.36■□□□□ 0.53
LINC00963-206ENST00000453213 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
LINC00963-206ENST00000453213 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
LINC00963-206ENST00000453213 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
LINC00963-206ENST00000453213 CUX2O14529 1486 aa18.01■□□□□ 0.47
LINC00963-206ENST00000453213 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
LINC00963-206ENST00000453213 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
LINC00963-206ENST00000453213 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
LINC00963-206ENST00000453213 NESP48681 1621 aa17.51■□□□□ 0.39
LINC00963-206ENST00000453213 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
LINC00963-206ENST00000453213 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
LINC00963-206ENST00000453213 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
LINC00963-206ENST00000453213 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
LINC00963-206ENST00000453213 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
LINC00963-206ENST00000453213 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
LINC00963-206ENST00000453213 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
LINC00963-206ENST00000453213 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
LINC00963-206ENST00000453213 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
LINC00963-206ENST00000453213 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
LINC00963-206ENST00000453213 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
LINC00963-206ENST00000453213 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
LINC00963-206ENST00000453213 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
LINC00963-206ENST00000453213 WDR62O43379 1518 aa17.07■□□□□ 0.32
LINC00963-206ENST00000453213 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
LINC00963-206ENST00000453213 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
LINC00963-206ENST00000453213 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
LINC00963-206ENST00000453213 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
LINC00963-206ENST00000453213 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
LINC00963-206ENST00000453213 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
LINC00963-206ENST00000453213 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
LINC00963-206ENST00000453213 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
LINC00963-206ENST00000453213 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
LINC00963-206ENST00000453213 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
LINC00963-206ENST00000453213 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
LINC00963-206ENST00000453213 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
LINC00963-206ENST00000453213 CFTRP13569 1480 aa16.73■□□□□ 0.27
LINC00963-206ENST00000453213 WIZO95785 1651 aa16.68■□□□□ 0.26
LINC00963-206ENST00000453213 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
LINC00963-206ENST00000453213 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
LINC00963-206ENST00000453213 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
LINC00963-206ENST00000453213 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
LINC00963-206ENST00000453213 FBLN2P98095 1184 aa16.51■□□□□ 0.23
LINC00963-206ENST00000453213 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
LINC00963-206ENST00000453213 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
LINC00963-206ENST00000453213 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
LINC00963-206ENST00000453213 CHD1O14646 1710 aa16.45■□□□□ 0.22
LINC00963-206ENST00000453213 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00963-206ENST00000453213 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
LINC00963-206ENST00000453213 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
LINC00963-206ENST00000453213 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
LINC00963-206ENST00000453213 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
LINC00963-206ENST00000453213 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
LINC00963-206ENST00000453213 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
LINC00963-206ENST00000453213 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
LINC00963-206ENST00000453213 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
LINC00963-206ENST00000453213 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
LINC00963-206ENST00000453213 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
LINC00963-206ENST00000453213 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
LINC00963-206ENST00000453213 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
LINC00963-206ENST00000453213 SOGA1O94964 1423 aa16.21■□□□□ 0.19
LINC00963-206ENST00000453213 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
LINC00963-206ENST00000453213 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
LINC00963-206ENST00000453213 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
LINC00963-206ENST00000453213 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
LINC00963-206ENST00000453213 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
LINC00963-206ENST00000453213 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
LINC00963-206ENST00000453213 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
LINC00963-206ENST00000453213 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
LINC00963-206ENST00000453213 CUX1P39880 1505 aa15.95■□□□□ 0.14
LINC00963-206ENST00000453213 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
LINC00963-206ENST00000453213 KDM4FA0A1W2PPD8 638 aa15.92■□□□□ 0.14
LINC00963-206ENST00000453213 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
LINC00963-206ENST00000453213 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
LINC00963-206ENST00000453213 FAM69CQ0P6D2 419 aa15.9■□□□□ 0.14
LINC00963-206ENST00000453213 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
LINC00963-206ENST00000453213 NUP160Q12769 1436 aa15.86■□□□□ 0.13
LINC00963-206ENST00000453213 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
LINC00963-206ENST00000453213 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
LINC00963-206ENST00000453213 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
LINC00963-206ENST00000453213 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
LINC00963-206ENST00000453213 SHROOM2Q13796 1616 aa15.83■□□□□ 0.12
LINC00963-206ENST00000453213 KDM6BO15054 1643 aa15.79■□□□□ 0.12
LINC00963-206ENST00000453213 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
LINC00963-206ENST00000453213 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
LINC00963-206ENST00000453213 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms