RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.414e-17■□□□□ 10.2
CTDSP1-205ENST00000452977 DDX3XO00571 662 aaKnown RBP eCLIP15.58■□□□□ 0.083e-13■■■□□ 17.9
CTDSP1-205ENST00000452977 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.036e-12■■■■■ 82.1
CTDSP1-205ENST00000452977 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.65□□□□□ -0.063e-11■■■■□ 21.4
CTDSP1-205ENST00000452977 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.471e-10■■□□□ 14.2
CTDSP1-205ENST00000452977 EFTUD2Q15029 972 aaKnown RBP eCLIP14.48□□□□□ -0.095e-10■■■■■ 29
CTDSP1-205ENST00000452977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.643e-9■■■■■ 48.7
CTDSP1-205ENST00000452977 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.08□□□□□ -0.165e-9■■■■■ 432.9
CTDSP1-205ENST00000452977 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.75□□□□□ -0.377e-9■□□□□ 10.4
CTDSP1-205ENST00000452977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.428e-9■■■■■ 55.4
CTDSP1-205ENST00000452977 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.161e-8■■■■■ 33.1
CTDSP1-205ENST00000452977 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.361e-8■■■□□ 18.5
CTDSP1-205ENST00000452977 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.09■□□□□ 0.013e-8■■■■■ 70.6
CTDSP1-205ENST00000452977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.275e-8■■■■□ 24.7
CTDSP1-205ENST00000452977 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.495e-8■■■□□ 15.9
CTDSP1-205ENST00000452977 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.147e-8■□□□□ 10.4
CTDSP1-205ENST00000452977 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.139e-8■■□□□ 12.6
CTDSP1-205ENST00000452977 NKRFO15226 690 aaKnown RBP eCLIP18.09■□□□□ 0.491e-7■■□□□ 11.7
CTDSP1-205ENST00000452977 SMNDC1O75940 238 aaKnown RBP eCLIP13.96□□□□□ -0.173e-7■■■■■ 27.2
CTDSP1-205ENST00000452977 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.194e-7■■■□□ 16.6
CTDSP1-205ENST00000452977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.52■□□□□ 0.085e-7■■■□□ 16
CTDSP1-205ENST00000452977 CDC40O60508 579 aaKnown RBP eCLIP14.37□□□□□ -0.115e-7■■■■□ 22.3
CTDSP1-205ENST00000452977 PRPF4O43172 522 aaKnown RBP eCLIP14.83□□□□□ -0.046e-7■■■□□ 18.2
CTDSP1-205ENST00000452977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.5□□□□□ -0.097e-7■■□□□ 12.7
CTDSP1-205ENST00000452977 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.62■□□□□ 0.579e-7■□□□□ 11.3
CTDSP1-205ENST00000452977 FUSP35637 526 aaKnown RBP eCLIP10.35□□□□□ -0.759e-7■□□□□ 9.5
CTDSP1-205ENST00000452977 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■□□ 16.8
CTDSP1-205ENST00000452977 EWSR1Q01844 656 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■□□□ 11.9
CTDSP1-205ENST00000452977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■□□□□ 9.3
CTDSP1-205ENST00000452977 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■□□□ 13.3
CTDSP1-205ENST00000452977 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■□□□□ 10.2
CTDSP1-205ENST00000452977 NCBP2P52298 156 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■□□□ 12
CTDSP1-205ENST00000452977 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 37.4
CTDSP1-205ENST00000452977 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.112e-6■■■□□ 15.7
CTDSP1-205ENST00000452977 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.822e-6■■■■□ 22.8
CTDSP1-205ENST00000452977 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.692e-6■■□□□ 12.2
CTDSP1-205ENST00000452977 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■□ 26.2
CTDSP1-205ENST00000452977 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■■ 90.4
CTDSP1-205ENST00000452977 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■□□□□ 9.2
CTDSP1-205ENST00000452977 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.74□□□□□ -0.213e-6■□□□□ 10
CTDSP1-205ENST00000452977 HNRNPKP61978 463 aaKnown RBP eCLIP15.73■□□□□ 0.114e-6■□□□□ 8.8
CTDSP1-205ENST00000452977 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.525e-6■■■□□ 19.2
CTDSP1-205ENST00000452977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.625e-6■□□□□ 10.3
CTDSP1-205ENST00000452977 DDX6P26196 483 aaKnown RBP eCLIP16.65■□□□□ 0.265e-6■■■■■ 34.8
CTDSP1-205ENST00000452977 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.03□□□□□ -0.166e-6■■■■■ 38.3
CTDSP1-205ENST00000452977 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.358e-6■□□□□ 10.2
Retrieved 46 of 46 RNA–protein pairs in 8.8 ms