RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
THUMPD3-206ENST00000452837 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
THUMPD3-206ENST00000452837 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.07
THUMPD3-206ENST00000452837 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
THUMPD3-206ENST00000452837 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
THUMPD3-206ENST00000452837 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
THUMPD3-206ENST00000452837 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
THUMPD3-206ENST00000452837 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
THUMPD3-206ENST00000452837 HRCP23327 699 aa20.98■□□□□ 0.95
THUMPD3-206ENST00000452837 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
THUMPD3-206ENST00000452837 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
THUMPD3-206ENST00000452837 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
THUMPD3-206ENST00000452837 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
THUMPD3-206ENST00000452837 ABCC9O60706 1549 aa20.38■□□□□ 0.85
THUMPD3-206ENST00000452837 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
THUMPD3-206ENST00000452837 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
THUMPD3-206ENST00000452837 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
THUMPD3-206ENST00000452837 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
THUMPD3-206ENST00000452837 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
THUMPD3-206ENST00000452837 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
THUMPD3-206ENST00000452837 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
THUMPD3-206ENST00000452837 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
THUMPD3-206ENST00000452837 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
THUMPD3-206ENST00000452837 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
THUMPD3-206ENST00000452837 WIZO95785 1651 aa19.77■□□□□ 0.76
THUMPD3-206ENST00000452837 NACADO15069 1562 aa19.73■□□□□ 0.75
THUMPD3-206ENST00000452837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
THUMPD3-206ENST00000452837 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
THUMPD3-206ENST00000452837 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
THUMPD3-206ENST00000452837 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
THUMPD3-206ENST00000452837 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
THUMPD3-206ENST00000452837 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
THUMPD3-206ENST00000452837 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
THUMPD3-206ENST00000452837 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
THUMPD3-206ENST00000452837 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
THUMPD3-206ENST00000452837 SOGA1O94964 1423 aa19.36■□□□□ 0.69
THUMPD3-206ENST00000452837 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
THUMPD3-206ENST00000452837 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
THUMPD3-206ENST00000452837 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
THUMPD3-206ENST00000452837 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
THUMPD3-206ENST00000452837 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
THUMPD3-206ENST00000452837 NEUROD1Q13562 356 aa19.25■□□□□ 0.67
THUMPD3-206ENST00000452837 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
THUMPD3-206ENST00000452837 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
THUMPD3-206ENST00000452837 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
THUMPD3-206ENST00000452837 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
THUMPD3-206ENST00000452837 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
THUMPD3-206ENST00000452837 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
THUMPD3-206ENST00000452837 PELP1Q8IZL8 1130 aaKnown RBP19.15■□□□□ 0.66
THUMPD3-206ENST00000452837 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
THUMPD3-206ENST00000452837 EEA1Q15075 1411 aa19.07■□□□□ 0.64
THUMPD3-206ENST00000452837 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
THUMPD3-206ENST00000452837 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
THUMPD3-206ENST00000452837 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
THUMPD3-206ENST00000452837 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
THUMPD3-206ENST00000452837 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
THUMPD3-206ENST00000452837 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
THUMPD3-206ENST00000452837 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
THUMPD3-206ENST00000452837 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
THUMPD3-206ENST00000452837 CLIP1P30622 1438 aa18.88■□□□□ 0.61
THUMPD3-206ENST00000452837 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
THUMPD3-206ENST00000452837 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
THUMPD3-206ENST00000452837 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
THUMPD3-206ENST00000452837 KIF21BO75037 1637 aa18.84■□□□□ 0.61
THUMPD3-206ENST00000452837 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
THUMPD3-206ENST00000452837 MIER1Q8N108 512 aa18.83■□□□□ 0.6
THUMPD3-206ENST00000452837 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
THUMPD3-206ENST00000452837 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
THUMPD3-206ENST00000452837 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
THUMPD3-206ENST00000452837 APLP2Q06481 763 aa18.71■□□□□ 0.59
THUMPD3-206ENST00000452837 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
THUMPD3-206ENST00000452837 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
THUMPD3-206ENST00000452837 ARAP1Q96P48 1450 aa18.58■□□□□ 0.57
THUMPD3-206ENST00000452837 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
THUMPD3-206ENST00000452837 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
THUMPD3-206ENST00000452837 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
THUMPD3-206ENST00000452837 ERICH3Q5RHP9 1530 aa18.48■□□□□ 0.55
THUMPD3-206ENST00000452837 CUX1P39880 1505 aa18.46■□□□□ 0.55
THUMPD3-206ENST00000452837 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
THUMPD3-206ENST00000452837 RRBP1Q9P2E9 1410 aaKnown RBP18.41■□□□□ 0.54
THUMPD3-206ENST00000452837 ITGAEP38570 1179 aa18.4■□□□□ 0.54
THUMPD3-206ENST00000452837 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
THUMPD3-206ENST00000452837 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
THUMPD3-206ENST00000452837 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
THUMPD3-206ENST00000452837 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
THUMPD3-206ENST00000452837 CUX2O14529 1486 aa18.3■□□□□ 0.52
THUMPD3-206ENST00000452837 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
THUMPD3-206ENST00000452837 CFTRP13569 1480 aa18.29■□□□□ 0.52
THUMPD3-206ENST00000452837 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
THUMPD3-206ENST00000452837 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
THUMPD3-206ENST00000452837 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
THUMPD3-206ENST00000452837 IGF1RP08069 1367 aa18.23■□□□□ 0.51
THUMPD3-206ENST00000452837 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
THUMPD3-206ENST00000452837 MYT1Q01538 1121 aa18.21■□□□□ 0.51
THUMPD3-206ENST00000452837 PHLDB1Q86UU1 1377 aa18.16■□□□□ 0.5
THUMPD3-206ENST00000452837 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
THUMPD3-206ENST00000452837 TIAM1Q13009 1591 aa18.15■□□□□ 0.5
THUMPD3-206ENST00000452837 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
THUMPD3-206ENST00000452837 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
THUMPD3-206ENST00000452837 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms