RNA–Protein interactions for RNA: ENST00000451997.5

SH3BP1-203, Transcript of SH3 domain binding protein 1, humanhuman

TSL 2

Gene SH3BP1, Length 3,123 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP1-203ENST00000451997 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.591e-323■■■■■ 56.5
SH3BP1-203ENST00000451997 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.393e-59■■■■■ 48
SH3BP1-203ENST00000451997 SMNDC1O75940 238 aaKnown RBP eCLIP13.56□□□□□ -0.241e-33■■■■■ 119.7
SH3BP1-203ENST00000451997 GPKOWQ92917 476 aaPredicted RBP eCLIP14.13□□□□□ -0.157e-30■■□□□ 14.1
SH3BP1-203ENST00000451997 TROVE2P10155 538 aaKnown RBP eCLIP13.3□□□□□ -0.283e-19■■■■□ 21.9
SH3BP1-203ENST00000451997 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.273e-16■■■■■ 31.7
SH3BP1-203ENST00000451997 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.45□□□□□ -0.12e-15■■■□□ 14.9
SH3BP1-203ENST00000451997 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.212e-14■■■□□ 17.3
SH3BP1-203ENST00000451997 SND1Q7KZF4 910 aaKnown RBP eCLIP14.21□□□□□ -0.144e-13■■■■■ 47.6
SH3BP1-203ENST00000451997 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.96□□□□□ -0.496e-13■■■■■ 31.9
SH3BP1-203ENST00000451997 SF3B4Q15427 424 aaKnown RBP eCLIP12.57□□□□□ -0.44e-12■■■■□ 22
SH3BP1-203ENST00000451997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.212e-11■■■■□ 25.6
SH3BP1-203ENST00000451997 DDX6P26196 483 aaKnown RBP eCLIP11.51□□□□□ -0.575e-11■■■■■ 34.8
SH3BP1-203ENST00000451997 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.64□□□□□ -0.231e-10■■■■■ 28.4
SH3BP1-203ENST00000451997 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.522e-10■■■■■ 48.2
SH3BP1-203ENST00000451997 YWHAGP61981 247 aaKnown RBP eCLIP13.23□□□□□ -0.295e-10■■■■■ 34.7
SH3BP1-203ENST00000451997 DDX3XO00571 662 aaKnown RBP eCLIP13.74□□□□□ -0.212e-9■■■■■ 44.4
SH3BP1-203ENST00000451997 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.53e-9■■■■■ 34.7
SH3BP1-203ENST00000451997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.133e-9■■■■■ 29.5
SH3BP1-203ENST00000451997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.293e-9■■□□□ 11.5
SH3BP1-203ENST00000451997 AKAP1Q92667 903 aaKnown RBP eCLIP11.94□□□□□ -0.53e-9■■■□□ 18.4
SH3BP1-203ENST00000451997 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.369e-9■■■■□ 19.6
SH3BP1-203ENST00000451997 ZRANB2O95218 330 aaKnown RBP eCLIP14.62□□□□□ -0.071e-8■■■■■ 56
SH3BP1-203ENST00000451997 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.211e-8■■■■■ 34
SH3BP1-203ENST00000451997 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.334e-8■□□□□ 8.5
SH3BP1-203ENST00000451997 FTOQ9C0B1 505 aaKnown RBP eCLIP14.99□□□□□ -0.014e-8■□□□□ 8.5
SH3BP1-203ENST00000451997 TIA1P31483 386 aaKnown RBP eCLIP11.98□□□□□ -0.495e-8■■□□□ 12.5
SH3BP1-203ENST00000451997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.77□□□□□ -0.29e-8■■■■■ 114.8
SH3BP1-203ENST00000451997 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.27□□□□□ -0.122e-7■■■□□ 14.6
SH3BP1-203ENST00000451997 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.362e-7■■■■□ 20.8
SH3BP1-203ENST00000451997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.243e-7■■■■□ 23.3
SH3BP1-203ENST00000451997 LARP4Q71RC2 724 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■■□□ 14.7
SH3BP1-203ENST00000451997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.884e-7■■■■□ 25.8
SH3BP1-203ENST00000451997 PPIGQ13427 754 aaKnown RBP eCLIP12.19□□□□□ -0.464e-7■■■■■ 29
SH3BP1-203ENST00000451997 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.219e-7■■■■■ 31.6
SH3BP1-203ENST00000451997 PCBP2Q15366 365 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■■■□ 23.2
SH3BP1-203ENST00000451997 TIAL1Q01085 375 aaKnown RBP eCLIP12.53□□□□□ -0.49e-7■□□□□ 9.8
SH3BP1-203ENST00000451997 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■□□□□ 10.8
SH3BP1-203ENST00000451997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■□□□ 13.1
SH3BP1-203ENST00000451997 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■■■ 30.4
SH3BP1-203ENST00000451997 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■■■ 30.5
SH3BP1-203ENST00000451997 ILF3Q12906 894 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■□□□□ 8.3
SH3BP1-203ENST00000451997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■□□ 19.1
SH3BP1-203ENST00000451997 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■□□□□ 10.8
SH3BP1-203ENST00000451997 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■■ 34.6
SH3BP1-203ENST00000451997 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■■□□□ 13.8
SH3BP1-203ENST00000451997 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■■■■ 137.9
SH3BP1-203ENST00000451997 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.154e-6■■■■□ 20.8
SH3BP1-203ENST00000451997 RBM15Q96T37 977 aaKnown RBP eCLIP13.44□□□□□ -0.264e-6■■□□□ 11.7
Retrieved 49 of 49 RNA–protein pairs in 46.3 ms