RNA–Protein interactions for RNA: ENST00000451605.1

ERGIC3-210, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-210ENST00000451605 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
ERGIC3-210ENST00000451605 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
ERGIC3-210ENST00000451605 ABCC9O60706 1549 aa21.05■□□□□ 0.96
ERGIC3-210ENST00000451605 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
ERGIC3-210ENST00000451605 NACADO15069 1562 aa20.11■□□□□ 0.81
ERGIC3-210ENST00000451605 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
ERGIC3-210ENST00000451605 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
ERGIC3-210ENST00000451605 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
ERGIC3-210ENST00000451605 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
ERGIC3-210ENST00000451605 UNC13AQ9UPW8 1703 aa19.75■□□□□ 0.75
ERGIC3-210ENST00000451605 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.735e-10■■□□□ 14.5
ERGIC3-210ENST00000451605 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
ERGIC3-210ENST00000451605 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
ERGIC3-210ENST00000451605 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
ERGIC3-210ENST00000451605 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
ERGIC3-210ENST00000451605 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
ERGIC3-210ENST00000451605 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
ERGIC3-210ENST00000451605 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
ERGIC3-210ENST00000451605 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
ERGIC3-210ENST00000451605 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
ERGIC3-210ENST00000451605 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
ERGIC3-210ENST00000451605 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
ERGIC3-210ENST00000451605 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
ERGIC3-210ENST00000451605 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
ERGIC3-210ENST00000451605 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
ERGIC3-210ENST00000451605 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
ERGIC3-210ENST00000451605 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
ERGIC3-210ENST00000451605 WIZO95785 1651 aa18.25■□□□□ 0.51
ERGIC3-210ENST00000451605 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
ERGIC3-210ENST00000451605 NESP48681 1621 aa18.19■□□□□ 0.5
ERGIC3-210ENST00000451605 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
ERGIC3-210ENST00000451605 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
ERGIC3-210ENST00000451605 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
ERGIC3-210ENST00000451605 CUX2O14529 1486 aa18.02■□□□□ 0.48
ERGIC3-210ENST00000451605 CADPSQ9ULU8 1353 aa18.01■□□□□ 0.47
ERGIC3-210ENST00000451605 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
ERGIC3-210ENST00000451605 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.47
ERGIC3-210ENST00000451605 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
ERGIC3-210ENST00000451605 CFTRP13569 1480 aa17.88■□□□□ 0.45
ERGIC3-210ENST00000451605 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
ERGIC3-210ENST00000451605 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
ERGIC3-210ENST00000451605 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
ERGIC3-210ENST00000451605 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
ERGIC3-210ENST00000451605 WDR62O43379 1518 aa17.77■□□□□ 0.44
ERGIC3-210ENST00000451605 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
ERGIC3-210ENST00000451605 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
ERGIC3-210ENST00000451605 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
ERGIC3-210ENST00000451605 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-210ENST00000451605 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
ERGIC3-210ENST00000451605 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
ERGIC3-210ENST00000451605 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
ERGIC3-210ENST00000451605 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
ERGIC3-210ENST00000451605 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
ERGIC3-210ENST00000451605 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-210ENST00000451605 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-210ENST00000451605 CUX1P39880 1505 aa17.33■□□□□ 0.37
ERGIC3-210ENST00000451605 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
ERGIC3-210ENST00000451605 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
ERGIC3-210ENST00000451605 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
ERGIC3-210ENST00000451605 SOGA1O94964 1423 aa17.25■□□□□ 0.35
ERGIC3-210ENST00000451605 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■■□ 23.4
ERGIC3-210ENST00000451605 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
ERGIC3-210ENST00000451605 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
ERGIC3-210ENST00000451605 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
ERGIC3-210ENST00000451605 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
ERGIC3-210ENST00000451605 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
ERGIC3-210ENST00000451605 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
ERGIC3-210ENST00000451605 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
ERGIC3-210ENST00000451605 CHD1O14646 1710 aa17.12■□□□□ 0.33
ERGIC3-210ENST00000451605 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
ERGIC3-210ENST00000451605 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
ERGIC3-210ENST00000451605 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
ERGIC3-210ENST00000451605 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
ERGIC3-210ENST00000451605 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
ERGIC3-210ENST00000451605 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
ERGIC3-210ENST00000451605 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
ERGIC3-210ENST00000451605 FBLN2P98095 1184 aa17.01■□□□□ 0.31
ERGIC3-210ENST00000451605 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
ERGIC3-210ENST00000451605 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
ERGIC3-210ENST00000451605 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
ERGIC3-210ENST00000451605 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
ERGIC3-210ENST00000451605 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
ERGIC3-210ENST00000451605 TRIM41Q8WV44 630 aa16.97■□□□□ 0.31
ERGIC3-210ENST00000451605 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
ERGIC3-210ENST00000451605 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
ERGIC3-210ENST00000451605 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
ERGIC3-210ENST00000451605 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
ERGIC3-210ENST00000451605 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
ERGIC3-210ENST00000451605 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
ERGIC3-210ENST00000451605 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
ERGIC3-210ENST00000451605 NUP160Q12769 1436 aa16.82■□□□□ 0.28
ERGIC3-210ENST00000451605 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
ERGIC3-210ENST00000451605 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
ERGIC3-210ENST00000451605 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
ERGIC3-210ENST00000451605 IGF1RP08069 1367 aa16.74■□□□□ 0.27
ERGIC3-210ENST00000451605 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
ERGIC3-210ENST00000451605 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
ERGIC3-210ENST00000451605 CUL7Q14999 1698 aa16.71■□□□□ 0.27
ERGIC3-210ENST00000451605 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
ERGIC3-210ENST00000451605 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms