RNA–Protein interactions for RNA: ENST00000451312.5

NUCB1-206, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-206ENST00000451312 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.363e-24■■□□□ 11.6
NUCB1-206ENST00000451312 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.283e-14■□□□□ 9.2
NUCB1-206ENST00000451312 FTOQ9C0B1 505 aaKnown RBP eCLIP21.08■□□□□ 0.971e-11■■■■■ 54.4
NUCB1-206ENST00000451312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.18■■■□□ 2.422e-10■□□□□ 9.9
NUCB1-206ENST00000451312 YBX3P16989 372 aaKnown RBP eCLIP25.42■■□□□ 1.668e-10■□□□□ 10.6
NUCB1-206ENST00000451312 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.311e-8■■□□□ 12
NUCB1-206ENST00000451312 GTF2F1P35269 517 aaKnown RBP eCLIP20.72■□□□□ 0.913e-8■■■■□ 26
NUCB1-206ENST00000451312 AATFQ9NY61 560 aaKnown RBP eCLIP21.9■■□□□ 1.14e-8■■■■■ 78.2
NUCB1-206ENST00000451312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.21■■■□□ 2.115e-8■□□□□ 9.7
NUCB1-206ENST00000451312 SND1Q7KZF4 910 aaKnown RBP eCLIP18.42■□□□□ 0.547e-8■■■□□ 16.1
NUCB1-206ENST00000451312 RPS3P23396 243 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■■□ 21.8
NUCB1-206ENST00000451312 PUM1Q14671 1186 aaKnown RBP eCLIP20.03■□□□□ 0.82e-7■■■□□ 14.8
NUCB1-206ENST00000451312 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.95■□□□□ 0.33e-7■■■■■ 53.8
NUCB1-206ENST00000451312 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.85■□□□□ 0.773e-7■■■■□ 25
NUCB1-206ENST00000451312 DKC1O60832 514 aaKnown RBP eCLIP19.75■□□□□ 0.754e-7■■■■■ 32.2
NUCB1-206ENST00000451312 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.93■□□□□ 0.788e-7■■■■■ 34.5
NUCB1-206ENST00000451312 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.279e-7■■■■□ 21.1
NUCB1-206ENST00000451312 EIF4G2P78344 907 aaKnown RBP eCLIP24.18■■□□□ 1.469e-7■■■■■ 51.9
NUCB1-206ENST00000451312 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■■ 36.5
NUCB1-206ENST00000451312 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.972e-6■□□□□ 9
NUCB1-206ENST00000451312 PCBP1Q15365 356 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■□□□□ 10.4
NUCB1-206ENST00000451312 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.366e-6■■■■□ 21.3
NUCB1-206ENST00000451312 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.83■□□□□ 0.289e-6■■■■□ 26.1
Retrieved 23 of 23 RNA–protein pairs in 19.2 ms