RNA–Protein interactions for RNA: ENST00000449965.1

AC013439.1-201, humanhuman

BASIC

Gene AC013439.1, Length 1,239 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013439.1-201ENST00000449965 AEBP2Q6ZN18 517 aaPredicted RBP31.34■■■□□ 2.61
AC013439.1-201ENST00000449965 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
AC013439.1-201ENST00000449965 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
AC013439.1-201ENST00000449965 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
AC013439.1-201ENST00000449965 FOXD1Q16676 465 aa24.84■■□□□ 1.57
AC013439.1-201ENST00000449965 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
AC013439.1-201ENST00000449965 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
AC013439.1-201ENST00000449965 ADRA2BP18089 450 aa23.36■■□□□ 1.33
AC013439.1-201ENST00000449965 PIAS4Q8N2W9 510 aaPredicted RBP23.2■■□□□ 1.3
AC013439.1-201ENST00000449965 MSH5O43196 834 aa23.02■■□□□ 1.28
AC013439.1-201ENST00000449965 POTEDQ86YR6 584 aa22.25■■□□□ 1.15
AC013439.1-201ENST00000449965 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
AC013439.1-201ENST00000449965 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
AC013439.1-201ENST00000449965 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
AC013439.1-201ENST00000449965 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
AC013439.1-201ENST00000449965 CNKSR2Q8WXI2 1034 aa20.55■□□□□ 0.88
AC013439.1-201ENST00000449965 HOXD11P31277 338 aaPredicted RBP20.43■□□□□ 0.86
AC013439.1-201ENST00000449965 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
AC013439.1-201ENST00000449965 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
AC013439.1-201ENST00000449965 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
AC013439.1-201ENST00000449965 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
AC013439.1-201ENST00000449965 KCNA4P22459 653 aa19.86■□□□□ 0.77
AC013439.1-201ENST00000449965 RNF39Q9H2S5 420 aa19.74■□□□□ 0.75
AC013439.1-201ENST00000449965 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
AC013439.1-201ENST00000449965 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
AC013439.1-201ENST00000449965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.7
AC013439.1-201ENST00000449965 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
AC013439.1-201ENST00000449965 C1QBPQ07021 282 aaKnown RBP19.4■□□□□ 0.7
AC013439.1-201ENST00000449965 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
AC013439.1-201ENST00000449965 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
AC013439.1-201ENST00000449965 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
AC013439.1-201ENST00000449965 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
AC013439.1-201ENST00000449965 CAPN15O75808 1086 aa18.71■□□□□ 0.59
AC013439.1-201ENST00000449965 DSG3P32926 999 aa18.57■□□□□ 0.56
AC013439.1-201ENST00000449965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
AC013439.1-201ENST00000449965 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
AC013439.1-201ENST00000449965 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
AC013439.1-201ENST00000449965 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
AC013439.1-201ENST00000449965 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
AC013439.1-201ENST00000449965 APLP2Q06481 763 aa18.41■□□□□ 0.54
AC013439.1-201ENST00000449965 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
AC013439.1-201ENST00000449965 ABCB7O75027 752 aa18.36■□□□□ 0.53
AC013439.1-201ENST00000449965 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
AC013439.1-201ENST00000449965 ZBTB22O15209 634 aa18.31■□□□□ 0.52
AC013439.1-201ENST00000449965 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
AC013439.1-201ENST00000449965 POLA2Q14181 598 aa18.04■□□□□ 0.48
AC013439.1-201ENST00000449965 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
AC013439.1-201ENST00000449965 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
AC013439.1-201ENST00000449965 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
AC013439.1-201ENST00000449965 ZBTB12Q9Y330 459 aaPredicted RBP17.54■□□□□ 0.4
AC013439.1-201ENST00000449965 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
AC013439.1-201ENST00000449965 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
AC013439.1-201ENST00000449965 POTEHQ6S545 545 aa17.44■□□□□ 0.38
AC013439.1-201ENST00000449965 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
AC013439.1-201ENST00000449965 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
AC013439.1-201ENST00000449965 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
AC013439.1-201ENST00000449965 FBLN2P98095 1184 aa17.25■□□□□ 0.35
AC013439.1-201ENST00000449965 CHRDL2Q6WN34 429 aa17.21■□□□□ 0.35
AC013439.1-201ENST00000449965 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
AC013439.1-201ENST00000449965 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
AC013439.1-201ENST00000449965 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
AC013439.1-201ENST00000449965 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
AC013439.1-201ENST00000449965 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
AC013439.1-201ENST00000449965 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
AC013439.1-201ENST00000449965 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
AC013439.1-201ENST00000449965 PIP4P2Q8N4L2 257 aa16.89■□□□□ 0.29
AC013439.1-201ENST00000449965 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
AC013439.1-201ENST00000449965 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
AC013439.1-201ENST00000449965 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
AC013439.1-201ENST00000449965 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
AC013439.1-201ENST00000449965 ABCC9O60706 1549 aa16.59■□□□□ 0.25
AC013439.1-201ENST00000449965 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
AC013439.1-201ENST00000449965 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
AC013439.1-201ENST00000449965 HAX1O00165 279 aa16.5■□□□□ 0.23
AC013439.1-201ENST00000449965 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
AC013439.1-201ENST00000449965 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
AC013439.1-201ENST00000449965 EVX2Q03828 476 aa16.43■□□□□ 0.22
AC013439.1-201ENST00000449965 SP7Q8TDD2 431 aaPredicted RBP16.43■□□□□ 0.22
AC013439.1-201ENST00000449965 C19orf67A6NJJ6 358 aa16.25■□□□□ 0.19
AC013439.1-201ENST00000449965 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
AC013439.1-201ENST00000449965 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
AC013439.1-201ENST00000449965 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
AC013439.1-201ENST00000449965 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
AC013439.1-201ENST00000449965 PROM2Q8N271 834 aa16.15■□□□□ 0.18
AC013439.1-201ENST00000449965 NACADO15069 1562 aa16.09■□□□□ 0.17
AC013439.1-201ENST00000449965 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
AC013439.1-201ENST00000449965 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
AC013439.1-201ENST00000449965 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
AC013439.1-201ENST00000449965 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
AC013439.1-201ENST00000449965 GABBR2O75899 941 aa15.98■□□□□ 0.15
AC013439.1-201ENST00000449965 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
AC013439.1-201ENST00000449965 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
AC013439.1-201ENST00000449965 FKBP8Q14318 412 aa15.93■□□□□ 0.14
AC013439.1-201ENST00000449965 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
AC013439.1-201ENST00000449965 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
AC013439.1-201ENST00000449965 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
AC013439.1-201ENST00000449965 ZNF579Q8NAF0 562 aaKnown RBP15.77■□□□□ 0.12
AC013439.1-201ENST00000449965 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
AC013439.1-201ENST00000449965 MIER1Q8N108 512 aa15.73■□□□□ 0.11
AC013439.1-201ENST00000449965 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms