RNA–Protein interactions for RNA: ENST00000448819.5

HFM1-204, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 540 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-204ENST00000448819 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.942e-25■■■□□ 17.4
HFM1-204ENST00000448819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.095e-23■■■■■ 209.5
HFM1-204ENST00000448819 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.56□□□□□ -0.883e-19■■■■□ 21.7
HFM1-204ENST00000448819 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.456e-18■■■■■ 61.7
HFM1-204ENST00000448819 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.671e-17■■■■■ 88.5
HFM1-204ENST00000448819 RPS3P23396 243 aaKnown RBP eCLIP8.91□□□□□ -0.988e-15■■■■□ 24.3
HFM1-204ENST00000448819 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.671e-14■■■■■ 57.8
HFM1-204ENST00000448819 FUSP35637 526 aaKnown RBP eCLIP6.38□□□□□ -1.391e-14■■■■■ 28.9
HFM1-204ENST00000448819 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.742e-14■■■■■ 31.9
HFM1-204ENST00000448819 NOLC1Q14978 699 aaKnown RBP eCLIP10.19□□□□□ -0.782e-13■■■■■ 55
HFM1-204ENST00000448819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.12□□□□□ -0.633e-13■■■□□ 18.8
HFM1-204ENST00000448819 PUS1Q9Y606 427 aaKnown RBP eCLIP6.79□□□□□ -1.328e-13■■■□□ 17.8
HFM1-204ENST00000448819 LARP4Q71RC2 724 aaKnown RBP eCLIP8.43□□□□□ -1.069e-13■■■□□ 17
HFM1-204ENST00000448819 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.341e-12■■■■■ 51.6
HFM1-204ENST00000448819 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.282e-12■■■■■ 41.8
HFM1-204ENST00000448819 NKRFO15226 690 aaKnown RBP eCLIP10.96□□□□□ -0.652e-12■■□□□ 14.5
HFM1-204ENST00000448819 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.55□□□□□ -1.043e-12■■■■■ 104.8
HFM1-204ENST00000448819 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.08□□□□□ -0.643e-12■■■■□ 19.7
HFM1-204ENST00000448819 TROVE2P10155 538 aaKnown RBP eCLIP7.78□□□□□ -1.164e-12■■■■■ 55.3
HFM1-204ENST00000448819 PCBP1Q15365 356 aaKnown RBP eCLIP10.4□□□□□ -0.747e-11■■■■■ 49.2
HFM1-204ENST00000448819 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.75□□□□□ -0.853e-10■■■■■ 27.5
HFM1-204ENST00000448819 SF3B4Q15427 424 aaKnown RBP eCLIP8.49□□□□□ -1.057e-10■■■■■ 81.8
HFM1-204ENST00000448819 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.911e-9■■■■□ 19.5
HFM1-204ENST00000448819 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.461e-9■■■□□ 15.4
HFM1-204ENST00000448819 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.422e-9■■■■■ 36.3
HFM1-204ENST00000448819 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.26□□□□□ -0.773e-9■■■■□ 20.1
HFM1-204ENST00000448819 XRCC6P12956 609 aaKnown RBP eCLIP10.38□□□□□ -0.756e-9■■■■■ 29.7
HFM1-204ENST00000448819 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.129e-9■■■■■ 71.9
HFM1-204ENST00000448819 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.03□□□□□ -0.961e-8■■■■■ 51.6
HFM1-204ENST00000448819 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.641e-8■■■■■ 31.6
HFM1-204ENST00000448819 ZRANB2O95218 330 aaKnown RBP eCLIP9.09□□□□□ -0.951e-8■■■■□ 21.4
HFM1-204ENST00000448819 RBM22Q9NW64 420 aaKnown RBP eCLIP9.26□□□□□ -0.932e-8■■■□□ 16.6
HFM1-204ENST00000448819 RPS11P62280 158 aaKnown RBP eCLIP7.27□□□□□ -1.252e-8■■■■■ 34.8
HFM1-204ENST00000448819 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.85□□□□□ -0.834e-8■□□□□ 9.2
HFM1-204ENST00000448819 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.714e-8■■■■□ 19.9
HFM1-204ENST00000448819 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.074e-8■■□□□ 12
HFM1-204ENST00000448819 DDX3XO00571 662 aaKnown RBP eCLIP9.34□□□□□ -0.915e-8■■□□□ 11.4
HFM1-204ENST00000448819 EIF3HO15372 352 aaKnown RBP eCLIP8.59□□□□□ -1.035e-8■■■■■ 43.1
HFM1-204ENST00000448819 HNRNPUQ00839 825 aaKnown RBP eCLIP11.4□□□□□ -0.588e-8■■■■□ 24.4
HFM1-204ENST00000448819 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.619e-8■■■■■ 29.2
HFM1-204ENST00000448819 AATFQ9NY61 560 aaKnown RBP eCLIP11.48□□□□□ -0.571e-7■■■■■ 182.5
HFM1-204ENST00000448819 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.351e-7■■■□□ 17.9
HFM1-204ENST00000448819 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.15□□□□□ -0.942e-7■■■■□ 21.5
HFM1-204ENST00000448819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■■□ 23.1
HFM1-204ENST00000448819 EFTUD2Q15029 972 aaKnown RBP eCLIP8.64□□□□□ -1.032e-7■■■□□ 17.5
HFM1-204ENST00000448819 DDX6P26196 483 aaKnown RBP eCLIP10.05□□□□□ -0.83e-7■■■■■ 42.7
HFM1-204ENST00000448819 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.45□□□□□ -1.224e-7■■■□□ 15.2
HFM1-204ENST00000448819 PTBP1P26599 531 aaKnown RBP eCLIP6.93□□□□□ -1.34e-7■■■■■ 36.6
HFM1-204ENST00000448819 ZC3H11AO75152 810 aaKnown RBP eCLIP10.46□□□□□ -0.735e-7■■□□□ 11.8
HFM1-204ENST00000448819 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.796e-7■■■□□ 16.1
HFM1-204ENST00000448819 AARSP49588 968 aaKnown RBP eCLIP10.19□□□□□ -0.786e-7■■■■□ 19.6
HFM1-204ENST00000448819 HNRNPA1P09651 372 aaKnown RBP eCLIP10.29□□□□□ -0.766e-7■■□□□ 12
HFM1-204ENST00000448819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.85□□□□□ -0.838e-7■■■■■ 88.3
HFM1-204ENST00000448819 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.35□□□□□ -1.239e-7■■■■■ 45.1
HFM1-204ENST00000448819 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.09□□□□□ -0.639e-7■■■■■ 34
HFM1-204ENST00000448819 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.971e-6■■■□□ 16.8
HFM1-204ENST00000448819 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.99□□□□□ -0.971e-6■□□□□ 8.1
HFM1-204ENST00000448819 NIPBLQ6KC79 2804 aaeCLIP8.46□□□□□ -1.062e-6■■■■■ 44.3
HFM1-204ENST00000448819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 31.4
HFM1-204ENST00000448819 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■□□□ 13.8
HFM1-204ENST00000448819 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■■■ 57.7
HFM1-204ENST00000448819 SF3B1O75533 1304 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■■■■ 135.2
HFM1-204ENST00000448819 SAFBQ15424 915 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■□□□□ 10.6
HFM1-204ENST00000448819 PUM1Q14671 1186 aaKnown RBP eCLIP10.15□□□□□ -0.785e-6■□□□□ 8.5
HFM1-204ENST00000448819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.62□□□□□ -0.877e-6■■□□□ 11.8
HFM1-204ENST00000448819 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.72□□□□□ -0.858e-6■■■■□ 21.4
Retrieved 66 of 66 RNA–protein pairs in 19.7 ms