RNA–Protein interactions for RNA: ENST00000448755.5

PCED1A-204, Transcript of PC-esterase domain containing 1A, humanhuman

TSL 3

Gene PCED1A, Length 1,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-204ENST00000448755 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.978e-15■■■■■ 113.6
PCED1A-204ENST00000448755 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■■ 46.4
PCED1A-204ENST00000448755 NONOQ15233 471 aaKnown RBP eCLIP20.98■□□□□ 0.952e-7■■■■□ 25.4
PCED1A-204ENST00000448755 PPIGQ13427 754 aaKnown RBP eCLIP21.64■■□□□ 1.052e-10■■■■□ 23.8
PCED1A-204ENST00000448755 LSM11P83369 360 aaKnown RBP eCLIP16.16■□□□□ 0.186e-8■■■■□ 19.4
PCED1A-204ENST00000448755 SF3A3Q12874 501 aaKnown RBP eCLIP16.56■□□□□ 0.242e-10■■■□□ 18.6
PCED1A-204ENST00000448755 EFTUD2Q15029 972 aaKnown RBP eCLIP17.65■□□□□ 0.426e-7■■■□□ 17.5
PCED1A-204ENST00000448755 SF3B4Q15427 424 aaKnown RBP eCLIP16.76■□□□□ 0.271e-9■■■□□ 17.5
PCED1A-204ENST00000448755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16■□□□□ 0.156e-12■■■□□ 16.3
PCED1A-204ENST00000448755 CDC40O60508 579 aaKnown RBP eCLIP17.11■□□□□ 0.333e-11■■■□□ 16.2
PCED1A-204ENST00000448755 PRPF4O43172 522 aaKnown RBP eCLIP17.56■□□□□ 0.43e-8■■■□□ 16.1
PCED1A-204ENST00000448755 PCBP2Q15366 365 aaKnown RBP eCLIP17.48■□□□□ 0.399e-12■■■□□ 15
PCED1A-204ENST00000448755 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.72■■□□□ 1.073e-15■■■□□ 14.7
PCED1A-204ENST00000448755 SMNDC1O75940 238 aaKnown RBP eCLIP16.59■□□□□ 0.252e-8■■■□□ 14.6
PCED1A-204ENST00000448755 DDX6P26196 483 aaKnown RBP eCLIP19.66■□□□□ 0.745e-6■■□□□ 14.2
PCED1A-204ENST00000448755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.645e-7■■□□□ 14.2
PCED1A-204ENST00000448755 SRSF1Q07955 248 aaKnown RBP eCLIP18.07■□□□□ 0.485e-7■■□□□ 14
PCED1A-204ENST00000448755 GTF2F1P35269 517 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■□□□ 13.9
PCED1A-204ENST00000448755 AARSP49588 968 aaKnown RBP eCLIP20.02■□□□□ 0.82e-7■■□□□ 13.7
PCED1A-204ENST00000448755 RBM15Q96T37 977 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■□□□ 13.1
PCED1A-204ENST00000448755 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.586e-7■■□□□ 13
PCED1A-204ENST00000448755 RBM5P52756 815 aaKnown RBP eCLIP23.21■■□□□ 1.313e-12■■□□□ 12.9
PCED1A-204ENST00000448755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.15■□□□□ 0.342e-13■■□□□ 12.9
PCED1A-204ENST00000448755 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.38■□□□□ 0.373e-7■■□□□ 12
PCED1A-204ENST00000448755 RBFOX2O43251 390 aaKnown RBP eCLIP14.38□□□□□ -0.115e-10■■□□□ 11.6
PCED1A-204ENST00000448755 PABPN1Q86U42 306 aaKnown RBP eCLIP38.67■■■■□ 3.781e-6■■□□□ 11.5
PCED1A-204ENST00000448755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.24e-10■□□□□ 10.6
PCED1A-204ENST00000448755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.45e-6■□□□□ 10.4
PCED1A-204ENST00000448755 U2AF1Q01081 240 aaKnown RBP eCLIP24.71■■□□□ 1.559e-7■□□□□ 10.3
PCED1A-204ENST00000448755 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.316e-8■□□□□ 10.1
PCED1A-204ENST00000448755 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.37■■□□□ 1.172e-9■□□□□ 10.1
PCED1A-204ENST00000448755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.98■■□□□ 1.273e-9■□□□□ 9.5
PCED1A-204ENST00000448755 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.181e-16■□□□□ 9
PCED1A-204ENST00000448755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.22■□□□□ 0.839e-14■□□□□ 8.9
PCED1A-204ENST00000448755 DDX3XO00571 662 aaKnown RBP eCLIP19.08■□□□□ 0.645e-8■□□□□ 8.8
PCED1A-204ENST00000448755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.62■□□□□ 0.736e-7■□□□□ 8.8
PCED1A-204ENST00000448755 U2AF2P26368 475 aaKnown RBP eCLIP20.81■□□□□ 0.925e-6■□□□□ 8.6
PCED1A-204ENST00000448755 RBM22Q9NW64 420 aaKnown RBP eCLIP18.62■□□□□ 0.572e-25■□□□□ 8.4
PCED1A-204ENST00000448755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.224e-6■□□□□ 8.2
Retrieved 39 of 39 RNA–protein pairs in 9.7 ms